| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,472,706 | Δ78 bp | pseudogene (2188‑2265/3495 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1472706 | 1472783 | 78 | 50 [0] | [0] 50 | ydbA | putative outer membrane protein, N‑terminal fragment |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1472705 | 0 (0.000) | 46 (0.830) | 32/256 | 0.5 | 100% | pseudogene (2187/3495 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| ? | NC_000913 | 1472784 = | 0 (0.000) | pseudogene (2266/3495 nt) | ydbA | putative outer membrane protein, N‑terminal fragment | |||||
CGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGGCAG > NC_000913/1472647‑1472920 | tcaatgttgaaggtatgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGc > 2:374689‑M2/138‑140 (MQ=255)tcaatgttgaaggtatgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGc > 2:604665‑M2/138‑140 (MQ=255) atgttgaaggtatgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTg < 1:426430‑M2/6‑1 (MQ=255) atgttgaaggtatgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTg < 1:437394‑M2/6‑1 (MQ=255) atgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGAtt < 2:765274‑M2/12‑1 (MQ=255) atgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGAtt > 1:765274‑M2/124‑135 (MQ=255) atgaacggtaacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAacac > 2:302773‑M2/124‑140 (MQ=255) aacaacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTAc < 1:404233‑M2/26‑1 (MQ=255) aacggtaatagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGc < 2:385872‑M2/29‑1 (MQ=255) ggaatagcagcgaagtgcattatggcgactatacgatgccggatgtgccgaagcccaatacggttagtgtaacgtcgggacgtgatcaggctggaggcagcatgaacGGCGTGGAAATTAACACGGGCTTTACCGCtggg > 2:549451‑M2/108‑139 (MQ=255) atagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACg < 1:839674‑M2/36‑1 (MQ=255) atagcagcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACg < 1:774906‑M2/36‑1 (MQ=255) gcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGc < 2:97845‑M2/38‑1 (MQ=255) gcgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGc > 1:97845‑M2/99‑136 (MQ=255) cgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACg > 1:694572‑M2/98‑133 (MQ=255) cgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACg < 2:694572‑M2/36‑1 (MQ=255) cgaagtgcattatggcgactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGaca > 1:526434‑M2/98‑140 (MQ=255) gactatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGa < 1:549451‑M2/59‑1 (MQ=255) actatacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGAt < 1:374689‑M2/60‑1 (MQ=255) tacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACg < 1:555797‑M2/64‑1 (MQ=255) tacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACg < 1:480165‑M2/64‑1 (MQ=255) tacgttgccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACg < 1:738639‑M2/64‑1 (MQ=255) gccggatgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTgg > 1:471073‑M2/71‑140 (MQ=255) tgtgccgaagcccaatacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTa < 1:604665‑M2/76‑1 (MQ=255) atacggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGAc > 1:765234‑M2/51‑140 (MQ=255) ggttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTg < 1:84536‑M2/94‑1 (MQ=255) ttagtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGAc > 2:802138‑M2/45‑140 (MQ=255) gtgtaacgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGcc < 2:118037‑M2/99‑1 (MQ=255) acgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCAc > 2:314879‑M2/37‑140 (MQ=255) cgtcgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCAcc > 2:816891‑M2/36‑140 (MQ=255) cgggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCa < 1:816891‑M2/108‑1 (MQ=255) gggaagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCaa < 2:363692‑M2/109‑1 (MQ=255) aagtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGt < 1:878427‑M2/112‑1 (MQ=255) gtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTcc < 1:49556‑M2/114‑1 (MQ=255) gtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTcc < 1:221916‑M2/114‑1 (MQ=255) gtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTcc < 2:765234‑M2/114‑1 (MQ=255) gtgatgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTcc < 2:711161‑M2/114‑1 (MQ=255) tgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTgg < 1:944993‑M2/118‑1 (MQ=255) tgaggctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTgg > 1:126277‑M2/23‑140 (MQ=255) gctggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATg > 1:567380‑M2/19‑140 (MQ=255) tggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGCCCGTGGTATGGa < 2:847956‑M2/124‑1 (MQ=255) ggtggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGAc > 2:141840‑M2/16‑140 (MQ=255) tggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTcc < 2:24417‑M2/114‑1 (MQ=255) tggcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTcc > 1:24417‑M2/14‑127 (MQ=255) gcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGcc < 1:428467‑M2/129‑1 (MQ=255) gcagcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGcc < 1:302773‑M2/129‑1 (MQ=255) gcatgaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCaaa > 1:493160‑M2/9‑140 (MQ=255) gaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGt < 1:717761‑M2/119‑1 (MQ=255) gaacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGt > 2:717761‑M2/5‑123 (MQ=255) aacGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGgcag > 1:708428‑M2/4‑140 (MQ=255) | CGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGGCAG > NC_000913/1472647‑1472920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |