Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,807,017 Δ46 bp coding (6‑51/1125 nt) waaG ← lipopolysaccharide glucosyltransferase I

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3807017 3807062 46 98 [0] [0] 96 waaG lipopolysaccharide glucosyltransferase I

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38070160 (0.000)93 (1.250) 59/268 0.1 100% coding (52/1125 nt) waaG lipopolysaccharide glucosyltransferase I
?NC_000913 3807063 = 0 (0.000)coding (5/1125 nt) waaG lipopolysaccharide glucosyltransferase I

Only 100 of 109 total aligned reads displayed.

TTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3806874‑3807016
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTTCTG  >  NC_000913/3807063‑3807201
                                                                                                                                                                                                                                                                                          
TTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTC                                                                                                                                                <  2:925032/140‑1
TTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTC                                                                                                                                                <  1:160451/140‑1
 TGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCA                                                                                                                                               >  2:893503/1‑140
 TGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCA                                                                                                                                               >  2:524526/1‑140
 TGCGTCCATGGTTGGTATGGGACTTAACTGGCACCGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATTGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCAC                                                                                                                                              >  1:1004416/1‑140
  GCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCAC                                                                                                                                              <  1:1080761/140‑1
   CGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACG                                                                                                                                             >  1:817147/1‑140
   CGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTCCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACG                                                                                                                                             >  1:1208143/1‑140
     TCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGAT                                                                                                                                           <  1:1029899/140‑1
         TGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATA                                                                                                                                       <  1:193255/140‑1
            TTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATT                                                                                                                                    <  2:310112/140‑1
             TGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAA                                                                                                                                      <  2:437435/137‑1
             TGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAA                                                                                                                                      >  1:437435/1‑137
             TGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCA                                                                                                                                               <  2:834177/128‑1
             TGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCA                                                                                                                                               >  1:834177/1‑128
              GGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGT                                                                                                                                  <  2:72126/140‑1
               GTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTG                                                                                                                                 >  2:269601/1‑140
                TATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTC                                                                                                                                                <  1:549166/124‑1
                  TGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCAT                                                                                                                              >  2:1026517/1‑140
                    GGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTC                                                                                                                            >  2:543796/1‑140
                     GACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCC                                                                                                                           >  2:835893/1‑140
                      ACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCT                                                                                                                          >  2:166449/1‑140
                       CTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTG                                                                                                                         <  2:964818/140‑1
                       CTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTG                                                                                                                         <  2:1115815/140‑1
                        TTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGT                                                                                                                        <  1:543796/140‑1
                          AACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTG                                                                                                                         <  1:723947/137‑1
                          AACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTG                                                                                                                         >  2:723947/1‑137
                                CACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAA                                                                                                                <  2:1180304/140‑1
                                     GAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGC                                                                                                           <  1:166449/140‑1
                                          AGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATTGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTT                                                                                                      <  2:1004416/140‑1
                                           GCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTC                                                                                                     <  1:415720/140‑1
                                               AAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGC                                                                                                 <  2:1225729/140‑1
                                                AATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCA                                                                                                >  1:37248/1‑140
                                                AATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCA                                                                                                >  2:12422/1‑140
                                                AATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCA                                                                                                >  1:76999/1‑140
                                                AATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCA                                                                                                >  1:822264/1‑140
                                                 ATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAA                                                                                               >  1:921188/1‑140
                                                       TCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTT                                                                                         >  1:977007/1‑140
                                                              ATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTA                                                                                  <  2:76999/140‑1
                                                              ATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTA                                                                                  >  1:1074330/1‑140
                                                               TCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAG                                                                                 >  1:965102/1‑140
                                                                 GCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCG                                                                               <  2:956335/140‑1
                                                                 GCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCG                                                                               >  1:1058705/1‑140
                                                                 GCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCG                                                                               <  2:35876/140‑1
                                                                  CCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGG                                                                              <  2:921188/140‑1
                                                                  CCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGG                                                                              <  1:269601/140‑1
                                                                    TTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCG                                                                            <  1:12422/140‑1
                                                                      CCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGAT                                                                          <  2:1058705/140‑1
                                                                         ACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCAC                                                                       <  2:1208143/140‑1
                                                                           GACTGAGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAT                                                                     <  1:1179293/140‑1
                                                                            ACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATC                                                                    <  2:37248/140‑1
                                                                            ACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATC                                                                    <  1:2710/140‑1
                                                                             CTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCC                                                                   <  1:893503/140‑1
                                                                              TGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCT                                                                  <  1:1026517/140‑1
                                                                                TGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCC                                                                >  1:1117959/1‑140
                                                                                TGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCC                                                                >  2:814309/1‑140
                                                                                TGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGG                                                                              <  2:910404/126‑1
                                                                                TGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGG                                                                              >  1:910404/1‑126
                                                                                      TACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATC                                                                    >  1:188146/1‑130
                                                                                      TACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATC                                                                    <  2:188146/130‑1
                                                                                       ACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGA                                                         >  1:790261/1‑140
                                                                                       ACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGC                                                              <  1:58133/135‑1
                                                                                       ACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGC                                                              >  2:58133/1‑135
                                                                                        CCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGAT                                                        <  2:790261/140‑1
                                                                                        CCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGAT                                                        >  1:698308/1‑140
                                                                                        CCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGAT                                                        >  1:93535/1‑140
                                                                                          CGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAA                                                      >  2:519084/1‑140
                                                                                          CGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGG                                                           <  1:579955/135‑1
                                                                                          CGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGG                                                           >  2:579955/1‑135
                                                                                            AACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACA                                                    >  2:851085/1‑140
                                                                                            AACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACA                                                    >  2:272220/1‑140
                                                                                            AACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACA                                                    >  1:705575/1‑140
                                                                                            AACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCC                                                                   >  1:1084979/1‑125
                                                                                            AACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCC                                                                   <  2:1084979/125‑1
                                                                                            AACATGGAGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACA                                                    >  2:30035/1‑140
                                                                                              CATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGA                                                  <  1:524526/140‑1
                                                                                              CATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGA                                                  >  2:705636/1‑140
                                                                                                 GGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAG                                               >  2:872602/1‑140
                                                                                                      CCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATT                                          >  2:129163/1‑140
                                                                                                           TGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTt                                     >  2:105071/1‑139
                                                                                                           TGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTG                                     >  2:768312/1‑140
                                                                                                              GGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTG                                  <  1:768312/140‑1
                                                                                                              GGCAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTG                                  <  2:93535/140‑1
                                                                                                                CAACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCG                                <  2:698308/140‑1
                                                                                                                 AACTGTTGATGCAATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGG                               <  1:519084/140‑1
                                                                                                                             AATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGC                   <  1:872602/140‑1
                                                                                                                              ATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCC                  >  1:305925/1‑140
                                                                                                                              ATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCC                  >  1:1281489/1‑140
                                                                                                                              ATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCC                  >  2:514846/1‑140
                                                                                                                              ATGCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCC                  >  1:424517/1‑140
                                                                                                                                GCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGG                >  1:1118099/1‑140
                                                                                                                                GCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGG                >  1:1105694/1‑140
                                                                                                                                GCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTC                             <  2:417327/127‑1
                                                                                                                                GCGCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTC                             >  1:417327/1‑127
                                                                                                                                  GCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGT              <  2:817147/140‑1
                                                                                                                                  GCATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGT              <  1:321879/140‑1
                                                                                                                                   CATAAAGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTACGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTC             >  1:853168/1‑140
                                                                                                                                           catGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTT     >  1:939046/4‑140
                                                                                                                                           CACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTT     >  1:1444/1‑140
                                                                                                                                              GATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTTCTG  >  2:294644/1‑140
                                                                                                                                                                                                                                                                                          
TTGCGTCCATGGTTGGTATGGGACTTAACTGGCACCTGAATAAGCTCAAATGCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3806874‑3807016
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTTCTG  >  NC_000913/3807063‑3807201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.