Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,807,017	Δ46 bp	coding (6‑51/1125 nt)	waaG ←	lipopolysaccharide glucosyltransferase I

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3807017	3807062	46	98 [0]	[0] 96	waaG	lipopolysaccharide glucosyltransferase I

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3807016	0 (0.000)	93 (1.250)	59/268	0.1	100%	coding (52/1125 nt)	waaG	lipopolysaccharide glucosyltransferase I
	?	NC_000913	3807063 =	0 (0.000)					coding (5/1125 nt)	waaG	lipopolysaccharide glucosyltransferase I

GCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTTCTG  >  NC_000913/3806925‑3807201                                                                                                                                           |                                                                                                                                           tccatggttggtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgAt                                                                                                                                           <  1:1029899‑M2/2‑1 (MQ=255)     tggttggtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATa                                                                                                                                       <  1:193255‑M2/6‑1 (MQ=255)        ttggtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAAtt                                                                                                                                    <  2:310112‑M2/9‑1 (MQ=255)         tggtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATaa                                                                                                                                      >  1:437435‑M2/131‑137 (MQ=255)         tggtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATaa                                                                                                                                      <  2:437435‑M2/7‑1 (MQ=255)          ggtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATtgt                                                                                                                                  <  2:72126‑M2/11‑1 (MQ=255)           gtatgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATtgtg                                                                                                                                 >  2:269601‑M2/129‑140 (MQ=255)              tgggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCAt                                                                                                                              >  2:1026517‑M2/126‑140 (MQ=255)                ggacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTc                                                                                                                            >  2:543796‑M2/124‑140 (MQ=255)                 gacttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTcc                                                                                                                           >  2:835893‑M2/123‑140 (MQ=255)                  acttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCt                                                                                                                          >  2:166449‑M2/122‑140 (MQ=255)                   cttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTg                                                                                                                         <  2:1115815‑M2/20‑1 (MQ=255)                   cttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTg                                                                                                                         <  2:964818‑M2/20‑1 (MQ=255)                    ttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatataccctaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGt                                                                                                                        <  2:287389‑M2/21‑1 (MQ=255)                    ttaactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGt                                                                                                                        <  1:543796‑M2/21‑1 (MQ=255)                      aactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTg                                                                                                                         >  2:723947‑M2/118‑137 (MQ=255)                      aactggcacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTg                                                                                                                         <  1:723947‑M2/20‑1 (MQ=255)                            cacctgaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGaa                                                                                                                <  2:1180304‑M2/29‑1 (MQ=255)                                 gaataagctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGc                                                                                                           <  1:166449‑M2/34‑1 (MQ=255)                                      agctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacattgtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtctt                                                                                                      <  2:1004416‑M2/39‑1 (MQ=255)                                       gctcaaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtcttc                                                                                                     <  1:415720‑M2/40‑1 (MQ=255)                                           aaatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGc                                                                                                 <  2:1225729‑M2/44‑1 (MQ=255)                                            aatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa                                                                                                >  2:12422‑M2/96‑140 (MQ=255)                                            aatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa                                                                                                >  1:37248‑M2/96‑140 (MQ=255)                                            aatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa                                                                                                >  1:822264‑M2/96‑140 (MQ=255)                                            aatgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa                                                                                                >  1:76999‑M2/96‑140 (MQ=255)                                             atgctttcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCaa                                                                                               >  1:921188‑M2/95‑140 (MQ=255)                                                   tcgggcaatcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCtt                                                                                         >  1:977007‑M2/89‑140 (MQ=255)                                                          atcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTa                                                                                  >  1:1074330‑M2/82‑140 (MQ=255)                                                          atcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTa                                                                                  <  2:76999‑M2/59‑1 (MQ=255)                                                           tcgccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAg                                                                                 >  1:965102‑M2/81‑140 (MQ=255)                                                             gccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcg                                                                               >  1:1058705‑M2/79‑140 (MQ=255)                                                             gccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcg                                                                               <  2:956335‑M2/62‑1 (MQ=255)                                                             gccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcg                                                                               <  2:35876‑M2/62‑1 (MQ=255)                                                              ccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcgg                                                                              <  2:921188‑M2/63‑1 (MQ=255)                                                              ccttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcgg                                                                              <  1:269601‑M2/63‑1 (MQ=255)                                                               cttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcggc                                                                             <  2:822264‑M2/64‑1 (MQ=255)                                                                ttcccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcggcg                                                                            <  1:12422‑M2/65‑1 (MQ=255)                                                                  cccacgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGAt                                                                          <  2:1058705‑M2/67‑1 (MQ=255)                                                                     acgactgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATcac                                                                       <  2:1208143‑M2/70‑1 (MQ=255)                                                                       gactgagtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAt                                                                     <  1:1179293‑M2/72‑1 (MQ=255)                                                                        actgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtc                                                                    <  2:1074330‑M2/73‑1 (MQ=255)                                                                        actgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtc                                                                    <  2:37248‑M2/73‑1 (MQ=255)                                                                        actgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtc                                                                    <  1:2710‑M2/73‑1 (MQ=255)                                                                         ctgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtcc                                                                   <  1:893503‑M2/74‑1 (MQ=255)                                                                          tgtgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtcct                                                                  <  1:1026517‑M2/75‑1 (MQ=255)                                                                            tgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcgg                                                                              >  1:910404‑M2/64‑126 (MQ=255)                                                                            tgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgcgg                                                                              <  2:910404‑M2/63‑1 (MQ=255)                                                                            tgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtcctcc                                                                >  1:1117959‑M2/64‑140 (MQ=255)                                                                            tgtatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtcctcc                                                                >  2:814309‑M2/64‑140 (MQ=255)                                                                              tatatacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGc                                                              <  2:965102‑M2/79‑1 (MQ=255)                                                                                  tacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtc                                                                    >  1:188146‑M2/58‑130 (MQ=255)                                                                                  tacccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtc                                                                    <  2:188146‑M2/73‑1 (MQ=255)                                                                                   acccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGc                                                              >  2:58133‑M2/57‑135 (MQ=255)                                                                                   acccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGc                                                              <  1:58133‑M2/79‑1 (MQ=255)                                                                                   acccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGa                                                         >  1:790261‑M2/57‑140 (MQ=255)                                                                                    cccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGAt                                                        >  1:698308‑M2/56‑140 (MQ=255)                                                                                    cccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGAt                                                        <  2:790261‑M2/85‑1 (MQ=255)                                                                                    cccgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGAt                                                        >  1:93535‑M2/56‑140 (MQ=255)                                                                                      cgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTgg                                                           <  1:579955‑M2/82‑1 (MQ=255)                                                                                      cgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTgg                                                           >  2:579955‑M2/54‑135 (MQ=255)                                                                                      cgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATaa                                                      >  1:891504‑M2/54‑140 (MQ=255)                                                                                      cgaacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATaa                                                      >  2:519084‑M2/54‑140 (MQ=255)                                                                                        aacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtcc                                                                   <  2:1084979‑M2/74‑1 (MQ=255)                                                                                        aacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACAtcc                                                                   >  1:1084979‑M2/52‑125 (MQ=255)                                                                                        aacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACa                                                    >  2:272220‑M2/52‑140 (MQ=255)                                                                                        aacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACa                                                    >  2:851085‑M2/52‑140 (MQ=255)                                                                                        aacatggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACa                                                    >  1:705575‑M2/52‑140 (MQ=255)                                                                                        aacatggaggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACa                                                    >  2:30035‑M2/52‑140 (MQ=255)                                                                                          catggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGa                                                  >  1:676788‑M2/50‑140 (MQ=255)                                                                                          catggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGa                                                  <  1:524526‑M2/91‑1 (MQ=255)                                                                                          catggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGa                                                  >  2:705636‑M2/50‑140 (MQ=255)                                                                                             ggtggccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAg                                               >  2:872602‑M2/47‑140 (MQ=255)                                                                                                  ccccgtgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATAtt                                          >  2:129163‑M2/42‑140 (MQ=255)                                                                                                       tgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATattttttt                                     >  2:105071‑M2/37‑139 (MQ=255)                                                                                                       tgcggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTttg                                     >  2:768312‑M2/37‑140 (MQ=255)                                                                                                          ggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTttgttg                                  <  1:768312‑M2/107‑1 (MQ=255)                                                                                                          ggcaactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTttgttg                                  <  2:93535‑M2/107‑1 (MQ=255)                                                                                                            caactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCg                                <  2:698308‑M2/109‑1 (MQ=255)                                                                                                             aactgttgatgcaatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCgg                               <  1:519084‑M2/110‑1 (MQ=255)                                                                                                                         aatgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGc                   <  1:872602‑M2/122‑1 (MQ=255)                                                                                                                          atgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGcc                  >  1:305925‑M2/18‑140 (MQ=255)                                                                                                                          atgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGcc                  >  2:514846‑M2/18‑140 (MQ=255)                                                                                                                          atgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGcc                  >  1:1281489‑M2/18‑140 (MQ=255)                                                                                                                          atgcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGcc                  >  1:424517‑M2/18‑140 (MQ=255)                                                                                                                            gcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTc                             <  2:417327‑M2/112‑1 (MQ=255)                                                                                                                            gcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTc                             >  1:417327‑M2/16‑127 (MQ=255)                                                                                                                            gcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCgg                >  1:1105694‑M2/16‑140 (MQ=255)                                                                                                                            gcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCgg                >  1:1118099‑M2/16‑140 (MQ=255)                                                                                                                            gcgcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCgg                >  1:1209719‑M2/16‑140 (MQ=255)                                                                                                                              gcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGt              <  1:321879‑M2/127‑1 (MQ=255)                                                                                                                              gcataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGt              <  2:817147‑M2/127‑1 (MQ=255)                                                                                                                               cataaagtcacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTACGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTc             >  1:853168‑M2/13‑140 (MQ=255)                                                                                                                                       catgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCAtttt     >  1:939046‑M2/5‑140 (MQ=255)                                                                                                                                       cacgATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCAtttt     >  1:1444‑M2/5‑140 (MQ=255)                                                                                                                                          gATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTTCTg  >  2:294644‑M2/2‑140 (MQ=255)                                                                                                                                           |                                                                                                                                           GCTTTCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGGCGATCACATCCTCCGCTGGGATAACAGAAAGATATTTTTTGTTGCGGTCAAGTTCATGCCGGGTCGGCATTTTCTG  >  NC_000913/3806925‑3807201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑