| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,142,427 | Δ257 bp | coding (1685‑1941/3186 nt) | rne ← | ribonuclease E |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1142427 | 1142683 | 257 | 35 [0] | [0] 35 | rne | ribonuclease E |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1142426 | 0 (0.000) | 32 (0.700) | 25/264 | 0.7 | 100% | coding (1942/3186 nt) | rne | ribonuclease E |
| ? | NC_000913 | 1142684 = | 0 (0.000) | coding (1684/3186 nt) | rne | ribonuclease E | |||||
TTCTTGTTGCGCCTGACGTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGCTGTGCCTGGCGACGATTACGACGGTTTTCTTCGCGATTATCGCTGCCTTCAGTACGTTCACTACGGGTGTCGCGGCGCTCATTACGGTCACGGCGGTTGTTCTGACGAGGCTTGCGACGATCCTGTTGACGTTC > NC_000913/1142289‑1142561 | ttcttGTTGCGCCTGACGTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgt < 2:416072‑M1/140‑3 (MQ=255) ccTGACGTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgc > 2:395034‑M1/1‑127 (MQ=255) aCGTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagct > 2:564677‑M1/1‑123 (MQ=255) gTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagcttt < 1:574591‑M1/140‑20 (MQ=255) gTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagcttt < 1:391956‑M1/140‑20 (MQ=255) atcatTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgct < 2:323704‑M1/140‑27 (MQ=255) atcatTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgct < 1:395034‑M1/140‑27 (MQ=255) tACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagc > 1:4733‑M1/1‑109 (MQ=255) ggcTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacagg < 1:244294‑M1/140‑41 (MQ=255) aCGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcg < 1:666198‑M1/140‑45 (MQ=255) cGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcgg < 1:536909‑M1/140‑46 (MQ=255) cACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcagg < 2:485057‑M1/140‑50 (MQ=255) gacgCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttc > 2:296001‑M1/1‑88 (MQ=255) ggcgCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctg > 1:507088‑M1/1‑83 (MQ=255) ggcgCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcgg < 1:45947‑M1/128‑46 (MQ=255) ggcgCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcgg > 2:45947‑M1/1‑83 (MQ=255) gctgctCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttgg > 1:787789‑M1/1‑76 (MQ=255) gctgctCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcaactggcgttgg > 2:734226‑M1/1‑76 (MQ=255) ctCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgca < 1:564677‑M1/140‑69 (MQ=255) ggcggTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggc < 1:296001‑M1/140‑75 (MQ=255) gTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcagggtcagccggcggtggcgcaggcggcgcat > 2:124725‑M1/1‑62 (MQ=255) gcgcTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccgg < 2:4733‑M1/140‑83 (MQ=255) aCCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaagggtg > 1:175820‑M1/1‑44 (MQ=255) cGGCTCTCACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcaactggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgtt < 1:734226‑M1/140‑112 (MQ=255) ctcACGCGTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccgga < 1:124725‑M1/140‑117 (MQ=255) cgTCTCGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgctta > 1:170902‑M1/1‑18 (MQ=255) tctcGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctataacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacg > 2:447676‑M1/1‑16 (MQ=255) tctcGGCAGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacg > 1:188461‑M1/1‑16 (MQ=255) aGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcg < 2:170902‑M1/140‑132 (MQ=255) aGTCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcg < 1:740072‑M1/140‑132 (MQ=255) tCTGCTGgtgttgccggtgcagctttcggtgctggagctataacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcgaa < 1:447676‑M1/140‑134 (MQ=255) tCTGCTGgtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcgaa > 1:774840‑M1/1‑7 (MQ=255) tgctggtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcgaact > 1:147860‑M1/1‑5 (MQ=255) tgctggtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcg < 2:674270‑M1/136‑132 (MQ=255) tgctggtgttgccggtgcagctttcggtgctggagctacaacaggcgcggcaggttcagctggcgttggcgcaggcggcacatccggcatggcaaaggttgccagcgcaggttgttccggacgcttacgttcagcg > 1:674270‑M1/1‑5 (MQ=255) | TTCTTGTTGCGCCTGACGTTTATCATCATTACGGCGGCGGCTACGTTCACGACGCGGCGCTTGCTGCTCGTCGGCGGTACGCGCTTTTTCCGTTACCTCAGCCTGCTGACGGCTCTCACGCGTCTCGGCAGTCTGCTGCTGTGCCTGGCGACGATTACGACGGTTTTCTTCGCGATTATCGCTGCCTTCAGTACGTTCACTACGGGTGTCGCGGCGCTCATTACGGTCACGGCGGTTGTTCTGACGAGGCTTGCGACGATCCTGTTGACGTTC > NC_000913/1142289‑1142561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |