| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1590765 = | 0 (0.000) | 1257 (32.560) | 178/266 | 0.0 | 99.4% | intergenic (‑229/+89) | yneL/hipA | putative HTH‑type transcriptional regulator YneL/serine/threonine kinase HipA |
| ? | NC_000913 | = 1647024 | 15 (0.390) | intergenic (+287/+150) | flxA/ydfW | Qin prophage; protein FlxA/Qin prophage; uncharacterized protein YdfW | |||||
Only 100 of 1285 total aligned reads displayed.
GAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTCATTACGCGCACCGCCCAGACTGACTCAGCGCGTTTCTGGCATATCCCCGGTAAAACAAGTAACAAACCACCCGAAAATGAACACCAGAAACGCGACTTAAGAATCTACCCTATGAATGGATATGCACTCAACCGAAT > NC_000913/1646886‑1647162 | aGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTca > 2:619261‑M2/1‑138 (MQ=255) aaCTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatg > 2:564312‑M2/1‑133 (MQ=255) cTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcg > 2:345696‑M2/1‑131 (MQ=255) cTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcg > 1:185383‑M2/1‑131 (MQ=255) gACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgca > 2:604394‑M2/1‑129 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac < 1:634557‑M2/140‑13 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac < 1:354313‑M2/140‑13 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac < 1:152615‑M2/140‑13 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac > 1:85745‑M2/1‑128 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac > 1:196932‑M2/1‑128 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac > 2:632374‑M2/1‑128 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcac > 2:295548‑M2/1‑128 (MQ=255) aCAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatg > 1:653726‑M2/1‑128 (MQ=255) cAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcacc < 2:227203‑M2/140‑14 (MQ=255) ccATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaata > 1:277510‑M2/1‑123 (MQ=255) ccATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaata > 2:118836‑M2/1‑123 (MQ=255) ccATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaata > 1:593911‑M2/1‑123 (MQ=255) aTGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatata < 1:229318‑M2/140‑20 (MQ=255) aTGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatata > 2:69461‑M2/1‑121 (MQ=255) cAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaacca > 2:159944‑M2/1‑116 (MQ=255) cAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaacca > 2:325245‑M2/1‑116 (MQ=255) aTTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaag < 2:498266‑M2/140‑27 (MQ=255) ttATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaagg < 1:294146‑M2/140‑28 (MQ=255) tGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaag < 2:554928‑M2/140‑31 (MQ=255) tGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaag < 1:113503‑M2/140‑31 (MQ=255) aaTTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaacc < 2:544113‑M2/131‑24 (MQ=255) aTTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaat > 1:321655‑M2/1‑107 (MQ=255) aTTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaa > 2:167431‑M2/1‑107 (MQ=255) cAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccag < 1:414714‑M2/140‑38 (MQ=255) cAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaagg < 1:551769‑M2/130‑28 (MQ=255) cAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaacca > 2:510339‑M2/1‑103 (MQ=255) tttCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttg > 1:563468‑M2/1‑97 (MQ=255) gTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggt > 2:129186‑M2/1‑92 (MQ=255) gTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggt < 1:62507‑M2/140‑49 (MQ=255) tCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatg > 1:209160‑M2/1‑88 (MQ=255) cACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatga > 1:446479‑M2/1‑87 (MQ=255) cACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatga > 2:197670‑M2/1‑87 (MQ=255) cACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatga > 2:466981‑M2/1‑87 (MQ=255) aCTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgat < 1:16204‑M2/140‑55 (MQ=255) tgtgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtca > 1:252311‑M2/1‑81 (MQ=255) tgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 1:457605‑M2/1‑79 (MQ=255) tgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 1:134663‑M2/1‑79 (MQ=255) tgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 2:642153‑M2/1‑79 (MQ=255) tgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 1:429361‑M2/1‑79 (MQ=255) tgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 1:434101‑M2/1‑79 (MQ=255) tgGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 1:509871‑M2/1‑79 (MQ=255) ggggACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgc > 2:476880‑M2/1‑78 (MQ=255) aCAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcat < 2:370005‑M2/140‑67 (MQ=255) aCAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtca < 1:479735‑M2/133‑60 (MQ=255) aGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcatta < 1:470219‑M2/140‑69 (MQ=255) tCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaac < 1:266345‑M2/140‑71 (MQ=255) tCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaac < 2:207993‑M2/140‑71 (MQ=255) tCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatg > 2:392498‑M2/1‑70 (MQ=255) aaaaCTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgac > 2:424636‑M2/1‑65 (MQ=255) aaaCTGCCAACT‑CCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgacc > 1:100662‑M2/1‑63 (MQ=255) aaCTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgacc > 2:105881‑M2/1‑63 (MQ=255) aCTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgacca > 1:520675‑M2/1‑62 (MQ=255) aCTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgacca > 2:380681‑M2/1‑62 (MQ=255) tGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaa < 1:125262‑M2/140‑81 (MQ=255) tGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaa > 2:360115‑M2/1‑60 (MQ=255) ccAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgtgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaacc < 2:441747‑M2/140‑83 (MQ=255) ccAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaacc < 1:530657‑M2/140‑83 (MQ=255) cAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccc > 1:74112‑M2/1‑57 (MQ=255) ccGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatggccaaaccccatatc > 2:81431‑M2/1‑51 (MQ=255) ccGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatc > 2:408607‑M2/1‑51 (MQ=255) ccGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatc > 2:282361‑M2/1‑51 (MQ=255) cGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatct > 2:91142‑M2/1‑50 (MQ=255) ttGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcactta > 1:58362‑M2/1‑44 (MQ=255) ttGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcactta > 1:399061‑M2/1‑44 (MQ=255) tGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttac < 2:214794‑M2/140‑98 (MQ=255) gCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggtagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaa > 1:343162‑M2/1‑42 (MQ=255) ctTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactacc > 2:266723‑M2/1‑39 (MQ=255) gCGGACATTAGCATAGGCTATTTTCCATAACGCCTcattatgcgcaccactataaaccaaggaataatccaggcgttggcggccatgtttgtcatattcattaacaatgaccaaaccccatatctcacttactaccatat < 2:146820‑M2/140‑106 (MQ=255) gCGGACATTAGCATAGGCTATTTACCATAACGCCTCATTATGCGCACCGCCCAGACTGACTCAGCGCGTTTCTGGCATATCCCCGGTAAAACAAGTAACAAACCACCCGAAAATGAACACCAGAAACGCGACTTAAGAAt < 1:496066/140‑1 (MQ=255) ttAGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggc < 1:95620‑M2/140‑113 (MQ=255) aGCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggctt < 1:543527‑M2/140‑115 (MQ=255) gCATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggctta > 2:526223‑M2/1‑25 (MQ=255) cATAGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaa > 1:660562‑M2/1‑24 (MQ=255) aGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccg < 1:307996‑M2/140‑120 (MQ=255) aGGCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccg > 1:390446‑M2/1‑21 (MQ=255) ggCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgt > 2:402766‑M2/1‑20 (MQ=255) gCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtc < 2:234848‑M2/140‑122 (MQ=255) gCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtc < 1:370962‑M2/140‑122 (MQ=255) gCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggct < 1:574853‑M2/132‑114 (MQ=255) gCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggct > 2:574853‑M2/1‑19 (MQ=255) gCTATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtatt < 1:220291‑M2/125‑107 (MQ=255) tATTTACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtcca < 2:252889‑M2/140‑124 (MQ=255) aTTTACCATAACGCCTcattatgcgcaccaatataacccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccat > 2:431925‑M2/1‑16 (MQ=255) tttACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatg < 1:330578‑M2/140‑126 (MQ=255) tttACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatg < 2:594277‑M2/140‑126 (MQ=255) ttACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgc > 2:487082‑M2/1‑14 (MQ=255) ttACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgc < 2:657278‑M2/140‑127 (MQ=255) ttACCATAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgc > 1:241844‑M2/1‑14 (MQ=255) aTAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgcaacct < 2:337195‑M2/140‑132 (MQ=255) aTAACGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgcaacct > 2:535985‑M2/1‑9 (MQ=255) aaCGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggctta > 1:607360‑M2/1‑7 (MQ=255) cGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgcaacctcaac < 2:455448‑M2/140‑136 (MQ=255) cGCCTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgcaacctcaac < 2:315555‑M2/140‑136 (MQ=255) cTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgcaacctcaacaca > 1:173613‑M2/1‑2 (MQ=255) cTcattatgcgcaccaatataaaccaaggaagaatccagtcgttggcggtcatgattgtcatgctcattaacaatgaccaaaccccatatctcacttactaccgtattctcggcttaaccgtccatgcaacctcaacaca > 2:181583‑M2/1‑2 (MQ=255) | GAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGCATAGGCTATTTACCATAACGCCTCATTACGCGCACCGCCCAGACTGACTCAGCGCGTTTCTGGCATATCCCCGGTAAAACAAGTAACAAACCACCCGAAAATGAACACCAGAAACGCGACTTAAGAATCTACCCTATGAATGGATATGCACTCAACCGAAT > NC_000913/1646886‑1647162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |