New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 285962 = | 75 (0.830) | 4 (0.050) | 4/408 | 7.8 | 4.8% | coding (568/1383 nt) | yagG | putative D‑xylonate transporter YagG |
? | NC_000913 | 286405 = | 89 (1.040) | coding (1011/1383 nt) | yagG | putative D‑xylonate transporter YagG | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CCGTAAAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/286206‑285962 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacgccgctGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCT > NC_000913/286405‑286638 CCGTAAAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACG < 1:132890/240‑1 CCGTAAAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACG < 2:121824/240‑1 CCGTAAAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCAC < 1:201993/239‑1 AAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCT < 1:201240/240‑1 AAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCT < 1:263137/240‑1 AAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCT < 1:923306/240‑1 CGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTC > 2:1030365/1‑239 TTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCT < 1:688368/140‑1 GACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCC > 1:995893/1‑240 AAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGT > 1:161002/1‑239 TGAAGAAGCAGACGTAGAGCAGCACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGC > 1:682409/1‑157 CACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGG > 2:158452/1‑239 CCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCA > 2:285511/1‑213 ACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGT < 2:639986/227‑1 GCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCT < 1:158454/240‑1 CCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCT < 1:407952/239‑1 CGCTGCAGTGGCTGATGGCTTGTGACGTGGTGGACTACGAGGAGAGCCGC > 2:67811/1‑50 CTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGT > 2:417155/1‑230 CCGTAAAGTAAAAACTGGGTCGCCAACTCCGGGTGATCCATCACGTATTTCACGAAGTAGAGCGTCGCCCCGCCGCGCACCACGTTGGAGCAGGTCGCCATCATCTTGAACGCGCACATGATGCGCCACTGGCTGTTGCCCAGCAGCAGCTTAAGGTCTTTCGCCACCGACGAGCCCGGCTGCACCTCAAAGGTGTAGCGCTCTTTGGTCGTGAAGAAGCAGACGTAGAGCAGCACCACGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/286206‑285962 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacgccgctGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCT > NC_000913/286405‑286638 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |