| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4468828 | NA (NA) | 6 (0.010) | 5/92 | NT | NA | intergenic (+122/+23) | rraB/yjgM | protein inhibitor of RNase E/putative acetyltransferase |
| ? | CP009273 | = 4468837 | NA (NA) | intergenic (+131/+14) | rraB/yjgM | protein inhibitor of RNase E/putative acetyltransferase | |||||
Only 100 of 133 total aligned reads displayed.
ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4468752‑4468828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgcccgcgTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < CP009273/4468837‑4468771 ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGA > 1:39184805/1‑68ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGA > 1:38757084/1‑68ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGA > 1:1284620/1‑68 TTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAA > 1:19433870/1‑68 TTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTAAGTTGTTAATGTTCGAA > 1:25225721/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:24697241/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:22622093/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:6026775/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:17405571/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:34110676/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:15793546/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:6413290/1‑68 TTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:37072805/1‑68 TGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:27755263/1‑67 TGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:35989945/1‑67 TAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGC > 1:17254070/1‑67 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAATCAAAACGTACGTTGTTAATTTTCGAATGCC < 1:28646077/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:30295255/1‑68 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:30902532/1‑68 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:41892573/1‑68 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:3302262/1‑68 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:31516248/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:32044067/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:5617793/67‑1 GCCCGGATAAGGCATTCATGTCACATCCGTCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:10089686/1‑67 GCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:16902553/1‑67 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:12781388/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:42408148/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:34941211/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:11325151/1‑68 cgGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG < 1:26585891/66‑1 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG < 1:19668114/68‑1 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG > 1:11102337/1‑68 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG > 1:32249054/1‑68 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG < 1:19403744/68‑1 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG > 1:17320863/1‑68 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCG < 1:38397539/66‑1 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCG < 1:16892886/66‑1 CCGGATAAGGCATTCATGTCACATCCCGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCG < 1:14435773/66‑1 CATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGTGTTCAGCTCGCGG > 1:22722412/1‑68 TCCGGCATAAACAAAACGTATGTTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCATTGGA > 1:2095673/1‑67 ACGTACGTTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACG > 1:20445903/1‑68 CGTTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGGTTTG > 1:11476209/1‑68 TTCGAATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGA > 1:16270826/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:41794200/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:10590054/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:30867085/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:39628305/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:37659393/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:37611563/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:35005736/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:37237813/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:25982590/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:14014855/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:168285/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:22411266/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:11288776/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:4537232/68‑1 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:8444726/1‑68 ATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGA < 1:25041823/68‑1 ATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGA < 1:20311645/68‑1 TGCCCGCGTGTTCAACTCGCGGGCATTCGCACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC > 1:37306235/1‑68 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGGTTTGTTTATGCCGGATGTGAC > 1:7657556/1‑68 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:38272604/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:32276161/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:40038133/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:25788375/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:16316907/68‑1 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:12055535/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:29629220/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:1487053/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:33905016/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:18735115/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:40221180/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:23423976/1‑68 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATG < 1:8166750/68‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATG < 1:12075173/68‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATG < 1:22897364/68‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:7542385/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:41027228/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:8846759/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:32470957/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:31592453/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:27561728/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:13744879/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:14600607/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:1814144/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:18049007/67‑1 GCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGCCATGAA > 1:40335395/1‑68 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:467288/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:10661793/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:1104691/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:12536210/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:14839542/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:5913027/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:38201255/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:22955545/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:27751558/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:30015026/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:330218/68‑1 ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4468752‑4468828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgcccgcgTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < CP009273/4468837‑4468771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |