| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 454 (0.860) | 39 (0.090) | 11/90 | NT | 8.4% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 491 (1.160) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 213 total aligned reads displayed.
TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:19612274/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:42650364/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:23417411/68‑1 AAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:7182282/1‑67 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCa > 1:43255223/1‑67 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:9664960/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:17737035/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:6481746/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:18737768/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:21697763/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:39394537/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:39385706/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:27005628/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:29413799/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:11237350/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:35077073/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:9696814/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:33746508/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGACAGCAGGATC > 1:25127812/1‑65 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:8939633/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:31154487/1‑67 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:20219216/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGAGCGCTGCGCC < 1:4995412/67‑1 GCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCTCTGCGCCGCCGGT > 1:18094206/1‑68 GCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGT > 1:29209964/1‑68 ATCTGCCACAGGCTGAAGATATCCAGCAGGATAGCTGCGCCGCCGGTGATGGGCGACTGTGCGGTta > 1:1252511/1‑65 ATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGGGATCGGCTACTGTGCGGTta > 1:10124310/1‑65 GCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGAGCGGCTACTGTGCGGTAACCGGT > 1:27179133/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGCTCGGCTACTGTGCGGGAACCGGGGAG > 1:8270242/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAGCCGGTGAG > 1:1186668/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:3702770/1‑68 AGGCTGAAGATAGCCAGCAGGATCGCTTCGCCGCCGGGGATCGGGTACTGTGCGGTACCCGGGGAGT > 1:8846378/1‑67 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGT > 1:144592/1‑67 GCTGAAGATAGCCAGCAGGCTCGCTGCGCCGCCGGTGATCGGCGACTGTGCGGTGACCGGTGAGTTC > 1:2600901/1‑67 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCG > 1:16659607/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCG > 1:14517785/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGGGATCGGCTACTGTGCGGTAACCGGTGAGTTCG > 1:11069120/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:36035633/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:34420847/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:11996390/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:10502632/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:15933218/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGAGAGTTCGATTGCG > 1:38559956/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:12650242/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:23021885/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:7454874/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCG > 1:3030826/1‑67 TCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:12284563/1‑67 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:5141191/1‑66 GCTGCGCCGGCGGTGATCGGGAACTGGGCGGTAGCCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:40121475/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCCGCGATCCT > 1:25781459/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCT < 1:30549916/68‑1 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:37702622/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:41581239/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:41867261/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:9812557/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:106603/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:2529891/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:21858512/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:29437026/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:30112982/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:11006742/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCCGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:39237961/1‑65 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGG < 1:8443046/68‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG < 1:14054865/67‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:15022404/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:33483497/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:22132176/1‑67 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:3475336/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:12882113/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:15790479/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:36669257/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:16587568/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:22505500/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:32903076/1‑66 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCTCCTGCTGGCTA > 1:8610832/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:3982343/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:9328838/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:4031766/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:38334392/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:14127575/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:6077729/1‑68 gGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:32703154/66‑1 CGCCGGTGATCGGCTACTGTGCTGTAACCTGTGAGTTCGATAGCTGCGCAGCGATCCTGCTGGCTATC < 1:4478305/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGGTAGCGGCGCAGCGATCCTGCTGGCTATC < 1:20442299/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCGGCGATCCTGCTGGCTATC < 1:35920556/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:17441458/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:28293408/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:7238565/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:18992850/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:34868974/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:22002322/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:27534268/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:32375107/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:33197812/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:26607186/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:21063362/67‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:28124529/67‑1 CGCCGGTGATCGGCTACTCTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:3620646/68‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < 1:31728335/68‑1 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |