| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 380 (0.720) | 22 (0.050) | 9/94 | NT | 7.2% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 245 (0.550) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314835‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:3050123/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:2237911/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:1183878/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:19433689/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:35605899/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:1504131/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:6628198/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:15139779/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:5787591/68‑1GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:38057621/68‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:42188077/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:15528808/67‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:16721674/67‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:11213069/68‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:1782099/68‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:36826469/67‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:24442942/67‑1 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG > 1:16843140/1‑68 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG < 1:11464539/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:42089836/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:23835681/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:12473025/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:6493396/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:16206037/68‑1 TCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT > 1:19418573/1‑67 TCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT > 1:4679363/1‑67 TCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGAATCAAAATTTCTACAGCCAGT > 1:23519103/1‑67 TCTGTTTGCTGATATCGTCGGTACTGGCGGTAACGGCAGCAACAGTATCAATATTTCTACCGCCAGT > 1:34348119/1‑67 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:28369248/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:42997611/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:10351363/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:32009592/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:42904908/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:35232049/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:41353796/67‑1 TTGCTGATATCGTCGGTACTGGCGGGGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:30820817/67‑1 TTGCTGATATCGGCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:29159761/67‑1 TTGCTGAAATAGTCGATACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:20636284/67‑1 TGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:37656447/68‑1 TGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:40195190/68‑1 TGATATCGTCGGCACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGAT < 1:41255417/67‑1 ATCGTCGCTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAG < 1:26091819/68‑1 ggcACTGGCGGTGACGGCAGCAACAGTATCAATAATTCTACCCCCAGTACCGACGATATCAGCAAACA < 1:4288332/65‑1 ggaACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTCCCGCCAGTACCGACGATATCAGCAAACA < 1:38743091/65‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:7592802/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:26398415/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:30854305/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:25702411/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:15780893/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:16723824/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:33716023/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:37410102/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:4799516/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:20842626/68‑1 TACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCCGTACCGACGATATCAGCAAACAG < 1:40549205/67‑1 TACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAG < 1:32584593/67‑1 ACTGGCGGGGACGGCAGCAACAGTATCAATATTTCTCCCGCCAGTACCGACGATATCAGCAAACAGA < 1:42343966/67‑1 GGCGGTGACGGCAGCAACAGTATCATTATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAAT < 1:20678842/68‑1 TGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGG < 1:41595346/67‑1 CAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGC > 1:20101589/1‑68 ACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTA > 1:33081693/1‑68 ACCGCCAGTACCGACGAGATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGT < 1:18208280/67‑1 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTA > 1:42378640/1‑67 CGCCAGTACGGACGATATCAGGAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC < 1:34602873/68‑1 CGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC > 1:29333753/1‑68 CGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC < 1:8497722/68‑1 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCG < 1:34374801/68‑1 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCG < 1:42060207/68‑1 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCG < 1:38483481/68‑1 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:31168694/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:42773126/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:3656942/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:12220065/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:15114992/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:15210910/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:39910437/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:21755780/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAAAGGCGCTGCGTTTTCCAGTAGCGC > 1:3428424/1‑68 CAGTACCGACGATATCAGCAAACAGATAATCCGGGCGGGGGAACGGCGCTGCGTTTTCCAGTAGCGCG < 1:1817803/68‑1 AGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGG > 1:30923851/1‑68 GTACCGACGATATCAGCAAACAGCTAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGT > 1:36717747/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:21907360/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:11620862/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:7603176/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:18463205/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:4572356/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT < 1:22660155/68‑1 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:23998818/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:26685601/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:35179557/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:35267565/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGCAACGGCGCTGCGTTTTCCAGAAGCGCCGTT > 1:9356955/1‑68 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314835‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |