| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 380 (0.720) | 22 (0.050) | 9/94 | NT | 7.2% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 245 (0.550) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 509 total aligned reads displayed.
ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAT > CP009273/1314696‑1314830 | aaccgcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggta > 1:35267565‑M1/68‑68 (MQ=255) accgcgctactggaaaacgcagcgccgttcccgcgcccggattagctgtttgctgatatcgtcggtAc > 1:36717747‑M1/67‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:39910437‑M1/64‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:21755780‑M1/64‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:31168694‑M1/64‑68 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:10428881/68‑1 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:20615387/68‑1 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:1497432/68‑1 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:29273856/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg < 1:38526712/68‑1 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:26604291/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:4406010/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:33535094/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:33930593/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:17586774/1‑68 (MQ=255) tactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTGGCGGt > 1:33081693‑M1/60‑68 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:30616148/67‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:24584059/67‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:477777/67‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:2216346/67‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa > 1:26341819/1‑68 (MQ=255) actggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatctcgtcggtACTGGCGGt < 1:18208280‑M1/9‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:42390355/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:27324922/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:23622486/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAg > 1:7269107/1‑68 (MQ=255) aCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa > 1:25559803/1‑68 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGaa > 1:30842345/1‑68 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:22526780/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:39156863/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:37452311/67‑1 (MQ=255) cGCTACGGGTGCCGTGTTTCGCCACTTTCATCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:17894456/67‑1 (MQ=255) gCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGaaa < 1:6610836/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:23413370/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:13444401/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:40623862/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:31940660/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:42132738/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:41191477/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:11952946/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAat < 1:6425096/67‑1 (MQ=255) tACGGGTGCCGTGTTTCGCCACTTTCAGCCCACAGGCAGCGGCGACAAACGCACTGGCGGTAGAAata < 1:16799703/68‑1 (MQ=255) caCGGTTGCCGTGTTTCGCCACTTTCACCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:21231148/67‑1 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACANACGCANTGGCGGTAGAAATATTg < 1:36194044/68‑1 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg > 1:31059381/1‑68 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:29721067/1‑68 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt < 1:35058177/67‑1 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt < 1:10029653/67‑1 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATa < 1:43220867/68‑1 (MQ=255) gccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTg > 1:20101589‑M1/44‑68 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACt < 1:19639787/67‑1 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTg < 1:3151172/68‑1 (MQ=255) gtgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGt < 1:6815757/68‑1 (MQ=255) gtgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGt < 1:38893671/68‑1 (MQ=255) tgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:3540525/1‑68 (MQ=255) tgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:5054302/1‑68 (MQ=255) gtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt < 1:26044815/67‑1 (MQ=255) gtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt < 1:34703640/67‑1 (MQ=255) ttCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTtgc < 1:21406460/67‑1 (MQ=255) ccACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:35708405/1‑68 (MQ=255) cACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:12462046/1‑67 (MQ=255) aCTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTc > 1:8738101/1‑68 (MQ=255) cTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCa < 1:24941956/68‑1 (MQ=255) ccggattatctgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCa < 1:41595346‑M1/37‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:5405853/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:20309099/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:28838921/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:13249534/68‑1 (MQ=255) gCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCa > 1:13848127/1‑68 (MQ=255) cccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGCTACTGTTGCTGCCGTCCCCGCCAg > 1:1931240/1‑68 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:27036323/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:9672525/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:9455241/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:16072246/68‑1 (MQ=255) acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGtgc < 1:10232747/68‑3 (MQ=255) acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTa > 1:37995746/1‑67 (MQ=255) acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:41349195/68‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:7592802‑M1/48‑1 (MQ=255) aGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:20803023/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:2284004/66‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacga < 1:1652531/68‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:10869705/67‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:8142122/67‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:14332979/67‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:18949578/67‑1 (MQ=255) ggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGatat < 1:12737441/68‑1 (MQ=255) ggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGata < 1:15533464/67‑1 (MQ=255) gcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc > 1:38222758/1‑68 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:32165463/67‑1 (MQ=255) gACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAg < 1:39597905/68‑1 (MQ=255) cgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:40195190‑M1/61‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:17015040/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:34305252/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:11532682/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:30154332/68‑1 (MQ=255) tcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:42904908‑M1/62‑1 (MQ=255) tcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:28369248‑M1/62‑1 (MQ=255) aCGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAAc > 1:24154218/1‑68 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:24027257/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:5592320/68‑1 (MQ=255) | ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAT > CP009273/1314696‑1314830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |