| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 539 (1.020) | 22 (0.050) | 8/100 | NT | 5.0% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 351 (0.750) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 103 total aligned reads displayed.
ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1834963‑1834892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834923‑1834988 ACCAGCCGCCGTGATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA < 1:19497195/67‑1ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:38128617/1‑68ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:15663948/1‑68 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTTCGTACATAAAGGTTTCGGA‑‑C > 1:43432405/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:32563437/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:18284670/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:37598844/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:3421289/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:23067186/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:33695020/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:2341360/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:18475949/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:32262670/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:25677826/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:26300921/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:27254641/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:2745263/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:29024389/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:28364847/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:29012446/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:17331601/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:8602045/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:11051820/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:40038812/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:8502570/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:40805282/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:8048532/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:42669236/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:15057908/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:14922457/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:14387252/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAACGTTTCGGA‑‑CG > 1:1091375/1‑68 CCAGCCGCCGTCATACACGGAAACAATCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:36245613/1‑67 CCAGCCGCCGTCATACACGCAAACATTCTTCAAACCCATGGCGCGTGCGTACATAAAGCTTTCGGA‑‑C > 1:11377433/1‑67 CAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGC > 1:34584867/1‑68 CAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGC > 1:462709/1‑68 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:32646667/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:11992661/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:34998709/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:38893948/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:28235365/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:18012467/1‑67 CGCCGTGATACACGGAAACATTCTTCCAACGCATGGCGCGTGCGTACTTAAAGGTTTCGGA‑‑CGCGCC < 1:41883605/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:8751288/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:20819723/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:38381814/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:18873939/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:37141920/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:4710574/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:16151743/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:21134237/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:23336612/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:40309263/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:14616067/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:18990605/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:3876775/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:10915733/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:41263647/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:31459765/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:30956084/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTGCGGA‑‑CGCG < 1:29991875/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTGTCGGA‑‑CGCG < 1:24352567/65‑1 CGCCGTCATACACGGAAACATGCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:36632580/65‑1 CGTCATACACGGACACATCCTTCCACCCCCTGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGG < 1:3429173/68‑1 CGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGG < 1:41329259/68‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:42412869/68‑1 CATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTT < 1:13764127/68‑1 TACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTGCGGA‑‑CGCGCCATGGGTTGG < 1:8267624/68‑1 ACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGA < 1:4166340/68‑1 cgcAAACATTCTTCCAACCCATGGCGCGTGCGGACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGA < 1:7408061/65‑1 CGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGA < 1:16827765/68‑1 AAACATTCTTCCAACCCATGGCGCGCGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAAT < 1:31132034/67‑1 AAACAATCTTCCAACCCATGGCGCGTGCGTACATAAAGGGTTCGGACGCGCGCCATGGGTTGGAAGA < 1:28954921/67‑1 AACAATCTTCCAACCCATGGCGCGCGCGGACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGT < 1:11716774/68‑1 cgcCCACCCCATGGCGCGTGCGTACATAAAGGTTACCGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:35670385/65‑1 CTTCCACCCCATGGCGCGTGCGTACATAAACCGTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:11348129/68‑1 CTTCCAACCCCTGGCGCGGGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:8424945/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:5528632/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:27921659/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:15135691/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:38281670/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:31694611/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTGTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:23409085/68‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:39263323/68‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:13753556/68‑1 A‑‑CGCGCCTTGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAA < 1:3331188/68‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAA > 1:34399165/1‑68 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAA > 1:4745728/1‑68 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:24574524/67‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:30046220/67‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:14034599/67‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:37760523/67‑1 ccCGCGCCATTGGCGGGAAGAATGTTTCCGTGTAGGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:20700622/66‑1 CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAA > 1:36244925/1‑68 CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAA > 1:7598279/1‑68 CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAA > 1:19268421/1‑68 CGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAA > 1:40292944/1‑68 CGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAA > 1:36089764/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:7948773/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:1062046/1‑68 ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1834963‑1834892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834923‑1834988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |