| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 539 (1.020) | 22 (0.050) | 8/100 | NT | 5.0% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 351 (0.750) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 621 total aligned reads displayed.
CTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGG > CP009273/1834826‑1834958 | tttggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatgGcgcg > 1:7598279‑M1/64‑68 (MQ=255) tgtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGcgcgcg > 1:29414006/1‑68 (MQ=255) ttggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatgGCGCG‑‑t > 1:34399165‑M1/63‑68 (MQ=255) gtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGcgcgcg > 1:27977315/1‑67 (MQ=255) gtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGcgcgcg > 1:16456884/1‑67 (MQ=255) tggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatgGCGCG‑‑t < 1:24574524‑M1/6‑1 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tcc > 1:19204556/1‑68 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tcc > 1:16264137/1‑68 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tcc > 1:7281542/1‑68 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tc < 1:10340220/67‑1 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tc < 1:38760163/67‑1 (MQ=255) aaGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:43476457/1‑68 (MQ=255) aaGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:472146/1‑68 (MQ=255) aGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:33630010/1‑67 (MQ=255) gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaaa > 1:36098527/1‑67 (MQ=255) gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaaa > 1:35454993/1‑67 (MQ=255) gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaaa > 1:29950263/1‑67 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAcc < 1:14076370/67‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAcc < 1:39424480/67‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAcc < 1:5875520/67‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:26079663/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:37898797/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:27298853/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:25527771/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:20924325/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCt < 1:5017992/68‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCt < 1:24044378/68‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTAt < 1:28271094/67‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTAt < 1:14432295/67‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTAt < 1:15501146/67‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATg > 1:18140558/1‑68 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATg > 1:13824607/1‑68 (MQ=255) tCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTac > 1:5589802/1‑68 (MQ=255) cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacg < 1:3221920/68‑1 (MQ=255) cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTac > 1:26856054/1‑67 (MQ=255) aCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:16717984/1‑68 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:2310950/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:18426247/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:30614793/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:40835452/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:1149979/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:12680915/1‑67 (MQ=255) cAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcacgc < 1:25909853/68‑1 (MQ=255) cAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcacgc > 1:27746389/1‑68 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCTCGCG‑‑GCCGAAACCTTTATGTACGCAcgcg < 1:38933597/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:23801791/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:33273867/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:20533189/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:21526334/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑GCCGAAACCTTTATGTACGCACGCGcc < 1:41456219/67‑1 (MQ=255) gcagcaAGTTTCACTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACgcgc < 1:12181300/66‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:8051562/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:39619040/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATgg < 1:34729732/66‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:36394914/1‑68 (MQ=255) aGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGtt > 1:42616090/1‑68 (MQ=255) tttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg > 1:8446440/1‑68 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:8760407/67‑1 (MQ=255) tCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaa > 1:42342518/1‑68 (MQ=255) tCATTCTACTGCGGCACCGGCTGGCGCGAG‑‑TCCGAAACCTTTATGTACGCAAGCGCCATGGGTTGgaa > 1:28790742/1‑68 (MQ=255) acggaaacattcttccaacccatgGCGCG‑‑TCCGACACCTTTATGTACGCACGCGCCATGGGTTGgaag < 1:23409085‑M1/44‑1 (MQ=255) acggaaacattcttccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaag < 1:31694611‑M1/44‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:25016791/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:22711616/68‑1 (MQ=255) ttCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaagaa > 1:20751281/1‑68 (MQ=255) tctcCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:34013070/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATg > 1:22066532/1‑41 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:41817618/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:21777297/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:67488/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:35678845/1‑68 (MQ=255) tACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:691803/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:10692673/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:15758489/1‑68 (MQ=255) gCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTcc > 1:9325928/1‑68 (MQ=255) tcttccaacccatgGCGCGCGTCCGAACCCTTTATGTACGCACGCGCCATGGGTTGGAAGATTGttt < 1:28954921‑M1/53‑1 (MQ=255) ggCACCGGCTTGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:42824708/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGCAACCTTTATGTACGCACGCGCCAGGGGTTGGAAGAATGTTTCCgt > 1:24316087/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGTGTTGGAAGAATGTTTCCgt < 1:17587310/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:4489291/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:11848175/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:7811536/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:13102155/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:14985164/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:38286517/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:4247951/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:30881433/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:31476110/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:40322708/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:3674466/1‑68 (MQ=255) cACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtgt > 1:3739530/1‑68 (MQ=255) cACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtg < 1:20121259/67‑1 (MQ=255) aCCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtgt < 1:17133879/67‑1 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg > 1:15183285/1‑67 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg > 1:1242888/1‑67 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg > 1:36997773/1‑67 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg > 1:11200171/1‑67 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcgg > 1:32646667‑M1/1‑67 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcgg > 1:34998709‑M1/1‑67 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:18873939‑M1/66‑1 (MQ=255) | CTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGG > CP009273/1834826‑1834958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |