| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2787742 = | 591 (1.120) | 40 (0.090) | 11/96 | NT | 7.8% | coding (131/1401 nt) | gabP | gamma‑aminobutyrate transporter |
| ? | CP009273 | 2787778 = | 433 (0.960) | coding (167/1401 nt) | gabP | gamma‑aminobutyrate transporter | |||||
Only 100 of 117 total aligned reads displayed.
CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2787816‑2787742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgggcTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT > CP009273/2787778‑2787843 CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC > 1:19687224/1‑68CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC > 1:17024423/1‑68CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC > 1:1542902/1‑68 cagTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:5678505/65‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:31114506/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:28181110/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:11800488/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:11929155/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:12476613/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:17468408/68‑1 CATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACC < 1:6103557/67‑1 CATTTCCGCCAACATACGGATAATCATAACCCCCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCG < 1:10096221/68‑1 ATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGC < 1:13240986/68‑1 TTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCC < 1:38008279/68‑1 TTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCC < 1:30847852/68‑1 TTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCC < 1:2018108/68‑1 TTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCG > 1:15288994/1‑68 TCCGCCAACATCCGCATAATCATAACCAGCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:42226984/68‑1 TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:26547757/68‑1 TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:23520325/68‑1 TCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGG < 1:22503878/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:23294066/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:30075780/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:29678337/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:25549156/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:35356906/68‑1 CCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG < 1:19471762/68‑1 CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG > 1:4641094/1‑67 CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG > 1:14056864/1‑67 CGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGG > 1:34830116/1‑67 GCCAACATCCGCATAATCATAACCACCAGTAGTCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:40113668/68‑1 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:38454642/68‑1 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCT < 1:28445487/68‑1 GCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC > 1:43080516/1‑67 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTAC < 1:25490117/68‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:32536940/67‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:26489475/67‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:25590518/67‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:17570753/67‑1 CAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTA < 1:27804296/67‑1 ACATCCGCATAATCATAACCACCACTCGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTG < 1:735936/68‑1 ATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGT < 1:31755461/68‑1 TCCGCATAATCATACCCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTG < 1:39363712/68‑1 cctCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:14047550/65‑1 CCGCATCATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGGAATACCGCCGGGCTACTGGTGG < 1:2896071/68‑1 CCGCATAATCATAACCCCCAGTAGCCCGGCGAACAGATCGGCCAGTAATACCGCCCGGCTACTGGTGG < 1:10126286/68‑1 CCGCATAATCATAACCACCAGTCGCCCGGCGACCAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:12299936/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:27427593/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:40816870/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:28516848/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:25328758/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:13982340/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:4583744/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:23361814/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:18232169/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:34767025/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:18626582/68‑1 CCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGG < 1:12839494/68‑1 CGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGT < 1:34138329/68‑1 aAATCATAACCACCACTAGCCCGGCGAACACATAGGCCAGTAAGCCCGCCGGGCTACTGGTGGTTATG < 1:31075224/67‑1 TAATCATACCCCCCCGTAGCCCGGCGAACAGATAGGCCAGTAATCCCGCCGGGCTACTGGTGGTTATG < 1:20762009/68‑1 TAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG < 1:27509606/68‑1 TAATCATAACCACCAGTAGCCCGGCGAACAGATAGACCAGTAATACCGCCGGGCTACTGGTGGTTATG < 1:14752611/68‑1 TAATCAAAACCACCAGTCGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATG < 1:20815550/68‑1 ATCATAACCCCCAGTCGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGAT < 1:34094262/68‑1 ATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGAT < 1:41142830/68‑1 TAACCACCAGAAGCCCGGCGAACAGATAGCCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATG < 1:34282041/68‑1 CACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGA < 1:22595788/68‑1 CACCAGTACCCCGGCGAACAGAAAGCCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGA < 1:20999465/68‑1 CCCGGCGAACAGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGG < 1:8201164/68‑1 CCGGCGAACACATAGGCCAGAAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGG < 1:7130515/67‑1 CCGGCCAACCGATAGGCCAGTAATACCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGA < 1:2969204/68‑1 CGGCGAACAGATAGGCCACTAATCCCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAA < 1:707296/68‑1 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:10051029/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:24442811/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:10679871/1‑68 CGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCG > 1:21257174/1‑68 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG < 1:5757128/68‑1 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG > 1:8939213/1‑68 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG < 1:10502054/68‑1 GCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGG < 1:24419295/68‑1 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:37429015/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGT > 1:23181782/1‑68 CCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATA > 1:41570655/1‑63 CGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTT < 1:31370252/68‑1 CGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTT < 1:31322916/68‑1 GGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTC > 1:10111047/1‑68 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:30056892/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:30264799/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:283450/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:26731243/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:40608604/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:40605169/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:495617/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:22192545/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:20923522/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:19523211/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:17320994/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:15000303/67‑1 CTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT < 1:12806166/67‑1 CCATTTCCGCCAACATCCGCATAATCATAACCACCAGTAGCCCGGCGAACAGATAGGCCAGTAATACCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2787816‑2787742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgggcTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGT > CP009273/2787778‑2787843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |