| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3614794 | NA (NA) | 7 (0.010) | 5/106 | NT | 100% | coding (2243/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | = 3614820 | 0 (0.000) | coding (2269/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
GAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGC > CP009273/3614751‑3614842 | gAAGGGCACCGGGTGGCGGTTCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:24220503‑M2/1‑68 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATTAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:40004787‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGTCGGCTGACCGGTGAGCGTCAGAC < 1:24805964‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCNGAC > 1:435955‑M2/1‑68 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:32489910‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:38148113‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:37407462‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:35929180‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:35475080‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:35142417‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:34023747‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:33974057‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:32821696‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:27469045‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:32336395‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:3220021‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:31576194‑M2/1‑68 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:3133770‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:27782058‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:30353137‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:43127099‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:9952999‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:8838477‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:8461875‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:663434‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:5301690‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:482834‑M2/1‑68 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:4534042‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:43382008‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:39997206‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:42962995‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:42321962‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:41869980‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:41433211‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:4095681‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:40869094‑M2/1‑68 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:40595184‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:40481815‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:2348590‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:15026174‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:15172748‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:16182305‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:16628579‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:1686967‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:16963010‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:14911236‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:14567734‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:2629111‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:21915831‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:12856900‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:12187160‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:2297654‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:23000396‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:11230974‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:10355385‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:26057599‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:24584667‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:10587826‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:25659728‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:10434943‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:25467309‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:10598681‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCAGTGAGCGTCAGAC < 1:41824466‑M2/68‑1 (MQ=255)gAAGGGCACCGGGTGGCGGTGCATTACAGGGATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:16276544‑M2/1‑68 (MQ=255)gAAGGGCACCGGGGGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:2709521‑M2/1‑68 (MQ=255)gAAGGGCACCGGGGGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:38839693‑M2/1‑68 (MQ=255) aaGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG < 1:7737970‑M2/68‑1 (MQ=255) aaGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:37460421‑M2/1‑68 (MQ=255) aaGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG < 1:25288375‑M2/68‑1 (MQ=255) aaGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG < 1:11801443‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:14184822‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:825153‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:2966427‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:10076325‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:28331248‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:33072037‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:23998491‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:23740279‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:2014509‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:11339593‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:41242815‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:36245263‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:35661847‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:3544535‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:23664454‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:32423406‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:3019690‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGACGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:30180209‑M2/1‑67 (MQ=255) aGGGCACCGGGGGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:38686864‑M2/1‑67 (MQ=255) aGGGCACCGGGGGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:22765435‑M2/1‑67 (MQ=255) gTGGCGGTGCATAACCGGTATGATGAGAAAGGCCGGCTGACCGGGGAGCGGCAGACGGcctttctca > 1:10123557‑M2/1‑58 (MQ=255) tGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGcctttctcatcatacc > 1:3367961‑M2/1‑51 (MQ=255) gCATTACAGGTATGATGACAACGGCCGCCGGCCCGGTGAGCGCCAGACGGcctttctcatcatacct > 1:27331637‑M2/1‑50 (MQ=255) gCATTACAGGTATGATCAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGcctttctcatcatacct > 1:28319253‑M2/1‑50 (MQ=255) tACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGcctttctcatcatacctgtaat > 1:18496910‑M2/1‑46 (MQ=255) tACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGcctttctcatcatacctgtaat > 1:31803999‑M2/1‑46 (MQ=255) | GAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGC > CP009273/3614751‑3614842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |