| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 372 (0.710) | 66 (0.170) | 23/84 | NT | 19.7% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 260 (0.660) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 503 total aligned reads displayed.
CCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCA > CP009273/3630149‑3630280 | cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGGGGGTCGgca > 1:27744268/1‑68 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggt < 1:5748892‑M1/68‑5 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgca > 1:24210573/1‑68 (MQ=255) aCCTGTACCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:8428129‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:38729793/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:41444844/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:24708484/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:35486795/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:30925487/1‑68 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:12461337/1‑68 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:1580808/1‑67 (MQ=255) ctctTCGCGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCCGCACGTTGAgg > 1:9547023/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:25792350/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:42975687/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:376397/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:35312484/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:20872482/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:19944970/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:13492296/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCATACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:33348368/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:8558359/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:34540611‑M1/68‑19 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgca < 1:28377250‑M1/68‑20 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgca < 1:14670097‑M1/68‑20 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:12656387/1‑68 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:36549288/1‑68 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:16686703/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:11659249/1‑68 (MQ=255) cAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:17334955/1‑67 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc > 1:17736539/1‑68 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc > 1:21794935/1‑68 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc < 1:37081797/68‑1 (MQ=255) gTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCa > 1:39909785/1‑68 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:660621/68‑1 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:12030201/68‑1 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:10002689/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:13229243/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaag > 1:4807815‑M1/1‑32 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:6974393/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:10448826/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:43330095/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:28623037/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCCGCAATCTtat > 1:13831286/1‑68 (MQ=255) agTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATaa > 1:292404/1‑67 (MQ=255) agTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATaa > 1:22166481/1‑67 (MQ=255) gTGAATGGCACCCGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagtt > 1:12129669‑M1/1‑27 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagag < 1:33776549‑M1/65‑39 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:30026311/1‑68 (MQ=255) gTGAAGGGCACCACACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagag < 1:35965604‑M1/65‑39 (MQ=255) tgccaccAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:23040304‑M1/65‑47 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:35693649‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:8875819‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:6282362/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:40999828/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:30788322/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:16476834/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:11912268/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:27492051/1‑68 (MQ=255) gCACCCGACCCGCGCGGGTCgggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:31626919‑M1/66‑47 (MQ=255) gCACCAGCCCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagcgttacaggt > 1:42742373‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:38367172/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:5402140/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:40272578/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:25224023/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:25407353/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:27065997/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:28156966/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:34817880/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagcgttacaggtgctg > 1:29625350‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg > 1:8093652‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:33015014/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:3029207/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:32076270/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:7839441/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:22711209/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCGCGTTGCGGCCAAATTGTTCGGCCATCTTATAACCAAACGGCGAcgcg > 1:19442432/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:40624796/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:31267471/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:211792/1‑67 (MQ=255) cccGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggc < 1:7368023‑M1/68‑57 (MQ=255) cccGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggc < 1:18790509‑M1/68‑57 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:9071815/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:15444675/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc < 1:920995/67‑1 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:4978624/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:36886923/1‑67 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc < 1:10296939‑M1/68‑62 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc > 1:19612194‑M1/1‑7 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc > 1:36276132‑M1/1‑7 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:43595108/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:18400359/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:39666730/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:26453954/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:37248027/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:10724305/1‑67 (MQ=255) ggTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCg > 1:20293139/1‑68 (MQ=255) gTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggt < 1:23597264‑M1/67‑65 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg < 1:29052649‑M1/67‑66 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGCCGCGCCCAGCCCCGGc > 1:41878159/1‑68 (MQ=255) gcGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATACCCAAACGGCGACGCGCCCAGCCCCgg < 1:31112203/66‑1 (MQ=255) | CCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCA > CP009273/3630149‑3630280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |