| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3870904 = | NA (NA) | 4 (0.010) | 4/84 | NT | NA | intergenic (‑79/+161) | yidB/gyrB | DUF937 family protein/DNA gyrase, subunit B |
| ? | CP009273 | 3870933 = | NA (NA) | intergenic (‑108/+132) | yidB/gyrB | DUF937 family protein/DNA gyrase, subunit B | |||||
Only 100 of 851 total aligned reads displayed.
GTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTAT > CP009273/3870837‑3870970 | attgaattttcatgattttgtcggccggataaggcgttcacgccgcatccggcaagaagctataaga > 1:20398144‑M1/67‑67 (MQ=255) attgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaa < 1:30031897‑M1/2‑1 (MQ=255) aaaGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaaaa > 1:19203518/1‑68 (MQ=255) aaaGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaaaa > 1:12466715/1‑68 (MQ=255) aaaGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaaaa > 1:28947178/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:36193089/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:20828270/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:5303601/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:24739768/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:16600943/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:40971523/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:38807602/1‑68 (MQ=255) aGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAg > 1:32003142/1‑68 (MQ=255) aattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg > 1:42344228‑M1/63‑68 (MQ=255) aattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg > 1:25608765‑M1/63‑68 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAggg > 1:29710339‑M1/62‑68 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAggg > 1:5615662‑M1/62‑68 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAggg > 1:34094920‑M1/62‑68 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:37926025‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:10020920‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:8539328‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:11337063‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:8242001‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:19884649‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:20088866‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:34967458‑M1/6‑1 (MQ=255) attttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAgg < 1:21422734‑M1/6‑1 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAgg < 1:23404793/66‑1 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAgg < 1:9631038/66‑1 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:36590174/1‑68 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:4446305/1‑68 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:12170170/1‑68 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:7121783/1‑68 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:15288194/1‑68 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:23711524/1‑68 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTAGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGc > 1:28489687/1‑68 (MQ=255) tcattattttgtaggccgtataaggcgttcacgccgcatccggcaagaagctataagAAAAGGGCGga > 1:12681450‑M1/58‑68 (MQ=255) tcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAGGGCGga > 1:21745758‑M1/58‑68 (MQ=255) tcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAGGGCGga > 1:2707168‑M1/58‑68 (MQ=255) tcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAGGGCGga > 1:42084337‑M1/58‑68 (MQ=255) aCGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGga < 1:26170764/68‑1 (MQ=255) aCGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGga < 1:22406879/68‑1 (MQ=255) aCGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGga < 1:40209907/68‑1 (MQ=255) gtgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGgaga < 1:25232908/68‑1 (MQ=255) gtgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGgaga < 1:8929027/68‑1 (MQ=255) gtgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGgaga > 1:19450750/1‑68 (MQ=255) gtgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGgaga < 1:33186071/68‑1 (MQ=255) gtgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGgaga > 1:17876302/1‑68 (MQ=255) atgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAGGGCGgaga > 1:17386586‑M1/56‑68 (MQ=255) atgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagAAAAGGGCGgaga > 1:23910283‑M1/56‑68 (MQ=255) gtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatg > 1:37514533/1‑68 (MQ=255) gtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatg > 1:30579153/1‑68 (MQ=255) tGACCCAAAAAGTATCGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatgat < 1:21099167/68‑1 (MQ=255) tGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAgatgat < 1:32946198/68‑1 (MQ=255) gACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGAtc < 1:6852351/68‑1 (MQ=255) cccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGAtct > 1:35791562/1‑67 (MQ=255) aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGc < 1:35246458/68‑1 (MQ=255) aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGc < 1:41413193/68‑1 (MQ=255) aaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGcc < 1:13095572/68‑1 (MQ=255) aaaaGTAAAGATTTGCGGGATGAAAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGcc < 1:33803253/68‑1 (MQ=255) aaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGccc < 1:39223711/68‑1 (MQ=255) aaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCt < 1:25910191/68‑1 (MQ=255) aGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCtt > 1:17073989/1‑68 (MQ=255) atatatTTGCGGGATGATAATTGCGGATTGCAGAACTAAAAAGGGCGGAGATGATCTCCGCCCtttt < 1:37271870/67‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCtttt < 1:14081924/67‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTc < 1:27974551/68‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTc < 1:34477128/68‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTc < 1:3273600/68‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTc < 1:13594688/68‑1 (MQ=255) taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCt < 1:6182781/68‑1 (MQ=255) taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCt < 1:29281752/68‑1 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata > 1:10841002/1‑68 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata > 1:7788129/1‑68 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata > 1:39582610/1‑68 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata > 1:6354760/1‑68 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata > 1:27756860/1‑68 (MQ=255) tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata > 1:18766964/1‑68 (MQ=255) gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGctt < 1:22830021/67‑1 (MQ=255) gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGct > 1:38340555/1‑66 (MQ=255) gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGct > 1:15650972/1‑66 (MQ=255) gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGct > 1:21954419/1‑66 (MQ=255) gatgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGcttctt > 1:40404144/1‑68 (MQ=255) taTTGCGGATTGCAGAATTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGa < 1:31161730/67‑1 (MQ=255) aaTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGa < 1:24341916/68‑1 (MQ=255) tGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATgc > 1:15973835/1‑68 (MQ=255) gCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATgcg > 1:14950015/1‑68 (MQ=255) ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATgcggc > 1:10345999/1‑68 (MQ=255) ttGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGt < 1:33479140/67‑1 (MQ=255) gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg > 1:742498/1‑67 (MQ=255) aaTAAAAAGGGCGGAGATGCTCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg < 1:22227991/65‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg < 1:26672449/65‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg < 1:31710920/65‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg < 1:14558108/65‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg < 1:9163423/65‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGc < 1:39846489/66‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGc < 1:18402672/66‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGc < 1:11701881/66‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGc < 1:43380476/66‑1 (MQ=255) aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGc < 1:42939933/66‑1 (MQ=255) tAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTa < 1:5039360/68‑1 (MQ=255) | GTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTAT > CP009273/3870837‑3870970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |