| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3920778 = | 530 (1.010) | 51 (0.120) | 13/88 | NT | 12.1% | coding (264/993 nt) | asnA | asparagine synthetase A |
| ? | CP009273 | 3920817 = | 326 (0.790) | coding (303/993 nt) | asnA | asparagine synthetase A | |||||
Only 100 of 789 total aligned reads displayed.
AGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCAC > CP009273/3920711‑3920844 | aGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGcgcg > 1:35987209/1‑68 (MQ=255) tCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGcgcg < 1:42116163/65‑1 (MQ=255) tCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGc < 1:37145054/68‑1 (MQ=255) tCGAAGTGGGTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGc < 1:14067733/68‑1 (MQ=255) gcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGaa < 1:37879947‑M1/7‑1 (MQ=255) gcgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGaa > 1:29856935‑M1/62‑68 (MQ=255) cgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAg < 1:5611507‑M1/8‑1 (MQ=255) cgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAg < 1:42902501‑M1/8‑1 (MQ=255) cgttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAg < 1:6594708‑M1/8‑1 (MQ=255) aGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAg > 1:13572655/1‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:26507521‑M1/60‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:28533302‑M1/60‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:40865905‑M1/60‑68 (MQ=255) gttcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAgg > 1:18306064‑M1/60‑68 (MQ=255) gTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAgg > 1:13308570/1‑68 (MQ=255) tcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGc > 1:41773729‑M1/58‑68 (MQ=255) tcccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGc > 1:25037123‑M1/58‑68 (MQ=255) ggTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAggg < 1:8532898/67‑1 (MQ=255) ggTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAgg < 1:33836131/66‑1 (MQ=255) ggTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAgg < 1:2192705/66‑1 (MQ=255) ggTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGc < 1:1746601/68‑1 (MQ=255) ggTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGCGCAACACGACTTCAGCGCGGGCGAAgg < 1:22487252/66‑1 (MQ=255) cccagtcccactggtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCt < 1:12151514‑M1/12‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt > 1:9237810/1‑68 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:31621842/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:26784384/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:10522202/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt > 1:6475079/1‑68 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:40207469/68‑1 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:3422270/68‑1 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:23983886/68‑1 (MQ=255) tcccactggtcaacatagaccgagtgcaacggggaaagacggtcttcatggGGGCGGAGGgctgggg < 1:19008131‑M1/16‑4 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac < 1:7908255/68‑1 (MQ=255) caCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac > 1:35417864/1‑67 (MQ=255) caCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACg < 1:29099653/68‑1 (MQ=255) cTGGCGAAGTGGTAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGca < 1:23513984/68‑1 (MQ=255) cTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGca < 1:11087599/68‑1 (MQ=255) cTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGc > 1:25490860/1‑67 (MQ=255) ggCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGcaca < 1:20734790/68‑1 (MQ=255) ggCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGcaca > 1:7079013/1‑68 (MQ=255) ggCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGcaca < 1:33232273/68‑1 (MQ=255) ggCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGcaca > 1:41345612/1‑68 (MQ=255) cGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACAt < 1:457569/67‑1 (MQ=255) gAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATg < 1:27748532/67‑1 (MQ=255) tGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAg > 1:16284591/1‑67 (MQ=255) tGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAg > 1:20218974/1‑67 (MQ=255) ggAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGcc < 1:29510345/68‑1 (MQ=255) ggAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGc < 1:9545970/67‑1 (MQ=255) ggAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGc < 1:23201608/67‑1 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTAGACCCACAAGAAAGccctgcg < 1:38375528‑M1/36‑4 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACCCGCACATGAaagcccgtc < 1:32952835‑M1/35‑4 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTc < 1:20976477‑M1/35‑1 (MQ=255) cGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTc > 1:12998450/1‑67 (MQ=255) cGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTc > 1:31010411/1‑67 (MQ=255) gTCAGACCTTAGGGCAACACGACTTCAGCGGGGGCGAAGGGCTGTACACGCACATGATAGCCCTTCGc < 1:26094377/68‑1 (MQ=255) gTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGc < 1:8070812/68‑1 (MQ=255) cgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATGGACGccctgcg < 1:19348773‑M1/36‑4 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGc > 1:14777060/1‑67 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGc > 1:41923455/1‑67 (MQ=255) cAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGcc < 1:17172286/67‑1 (MQ=255) gcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATGAAAGCCCTtcgcccgcg > 1:11875966‑M1/27‑65 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAgg < 1:27112469/35‑1 (MQ=255) ccTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAGAGCCCTTCGCCCCGAt > 1:21547282/1‑68 (MQ=255) ccTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGa < 1:15251300/67‑1 (MQ=255) ccTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGa < 1:5217218/67‑1 (MQ=255) ccTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGa < 1:5915846/67‑1 (MQ=255) ccTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGa < 1:28881596/67‑1 (MQ=255) ccTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGAt > 1:38997033/1‑68 (MQ=255) ccTTAGGGCAACACGACTGCAGCGCGGGCGAAGGGCGGTACACGCACATGAAAGCCCTTCGcccgcg < 1:27975797/67‑4 (MQ=255) ttAGGGCAACACGACTTCACCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGa < 1:16525324/68‑1 (MQ=255) gggCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAg > 1:36304862/1‑67 (MQ=255) gggCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAg > 1:8942520/1‑67 (MQ=255) gggCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAg > 1:43455987/1‑67 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:36685274/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:10315447/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:7410249/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:16848860/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:25289639/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:24122248/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:38175735/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:34499329/1‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:34839750/1‑68 (MQ=255) cAACACGACTTCAGCGCGGGGGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc < 1:18045895/67‑1 (MQ=255) cAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc < 1:22287112/67‑1 (MQ=255) aaCACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGt < 1:31324265/68‑1 (MQ=255) acccGACTTCCGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTc < 1:12604492/65‑1 (MQ=255) cGACTTCAGCGCGGGCGAAGGGCTGTACCCGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCttt > 1:41630012/1‑68 (MQ=255) ttCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTcc < 1:11429543/68‑1 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 1:305322/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 1:27452407/1‑68 (MQ=255) aGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGtt > 1:32509072/1‑68 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:15707970/1‑68 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:3012057/1‑68 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:40479245/1‑68 (MQ=255) cgcgGGCGAAGCGCTGTACACGCACATGAAAGCCCTTCGCCCCGAAGAAGACCGTCTTTCTCAGTTGc > 1:39578249/1‑68 (MQ=255) gcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:31886147/1‑67 (MQ=255) gcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:10048940/1‑67 (MQ=255) gcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCa < 1:1971916/68‑1 (MQ=255) gGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc < 1:28151546‑M1/65‑1 (MQ=255) gGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCGTTCTCCGTTGc < 1:1867926‑M1/65‑1 (MQ=255) | AGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCAC > CP009273/3920711‑3920844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |