| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4034176 | NA (NA) | 48 (0.110) | 9/92 | NT | 14.8% | intergenic (+180/+90) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | CP009273 | = 4034200 | 337 (0.640) | intergenic (+204/+66) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
Only 100 of 1068 total aligned reads displayed.
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGC > CP009273/4034124‑4034241 | gAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG < 1:34489502‑M2/68‑1 (MQ=255)gAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG < 1:19586182‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:36060192‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:27033291‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:31012811‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:21384503‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:21067614‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:6597289‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:12268700‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:11201785‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:9283380‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:2005914‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:42797674‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:39064866‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:17542418‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCATGACGG < 1:2588303‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:35072221‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:35365607‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:7906410‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:8889176‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:3039838‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:31493434‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:33254470‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:24020054‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:324450‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:18106586‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:29622161‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:41032654‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:5544887‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:5899372‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:12676320‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:7449485‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATACTGCCGGA < 1:4881774‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCAAAAACGGCCATGCATCAAATTAAGCAGAAGGCCAACCTGACGGA < 1:20676949‑M2/68‑1 (MQ=255) gTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGttg < 1:3717802‑M2/68‑4 (MQ=255) gTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 1:33531913‑M2/1‑66 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCATATTAAGCTGAAGGCCTTCCTGACGGATGGC > 1:27921016‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:9671602‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:31956876‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:34282446‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:34825720‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:29183393‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:36376828‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:3667834‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:40476763‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:6812509‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:26752626‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:15360865‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:18614060‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:21574138‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:28204584‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:1725604‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:25440217‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:30679492‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:11573064‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:24481666‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:23272599‑M2/67‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGATGGCC < 1:14781228‑M2/68‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:42283475‑M2/1‑67 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:28454253‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:14335651‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:43192477‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:40068368‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:1368776‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:32751113‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCAAAAACTGCCAGGCATCAAATTAAGCAGAACGCCATCCTGACCGATGG < 1:22744552‑M2/66‑1 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT < 1:11936958‑M2/68‑1 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC > 1:22271329‑M2/1‑67 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC > 1:25134547‑M2/1‑67 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC > 1:29951229‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:16778265‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:15717917‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:23640963‑M2/1‑67 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTACGCAGAAGGCCATCCTGACGGATGGCCTTctgc > 1:43530520‑M2/1‑61 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgc > 1:27469671‑M2/1‑61 (MQ=255) ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatt > 1:6276778‑M2/1‑57 (MQ=255) ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGgc < 1:24236247/68‑1 (MQ=40) cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGgc > 1:13156863/1‑67 (MQ=40) aTAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGa < 1:24813065/68‑1 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGACGGCCACCCTGACGGATGGCCTTctgcttaatttgatgcctg > 1:10595426‑M2/1‑49 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctg > 1:40772953‑M2/1‑49 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaa > 1:10262808/1‑68 (MQ=255) aCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttggtgcctg < 1:10000613‑M2/67‑20 (MQ=255) ACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa < 1:14062117‑M1/68‑1 (MQ=255) ACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa < 1:4555106‑M1/68‑1 (MQ=255) ACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa < 1:39511462‑M1/68‑1 (MQ=255) ACTGCCAGGCATCAAATTAAGCAGAAGGCCATACTGACGGATGGCCTTTTTGCAATGGCCCAGaaaaa < 1:17839669‑M1/68‑1 (MQ=255) ACTGCCAGGCATCAAATTAAGCAGAAGACAATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa < 1:26427069‑M1/68‑1 (MQ=255) gCCAGGCATCAAATTAACCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcag > 1:38049852‑M2/1‑45 (MQ=255) cAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagt > 1:20352915‑M2/1‑43 (MQ=255) cAGCCATCAAATAAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagt > 1:4151536‑M2/1‑43 (MQ=255) AGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGcc < 1:33868626‑M1/68‑1 (MQ=255) TCAAATTATGCAGAATGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATg > 1:41892716‑M1/1‑68 (MQ=255) taaaGCAGAAGGCCATCCTGAAGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACg < 1:19127036/66‑1 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTg > 1:16358799/1‑67 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTg > 1:38450858/1‑67 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTg > 1:16086312/1‑67 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTg > 1:8635835/1‑67 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCAACGCTg > 1:37655692/1‑67 (MQ=255) aGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgc > 1:21943941/1‑67 (MQ=255) | GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGC > CP009273/4034124‑4034241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |