| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 65558 | 483 (0.920) | 29 (0.060) | 8/98 | NT | 5.9% | coding (223/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 65573 | 498 (1.080) | coding (208/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 715 total aligned reads displayed.
CGCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGAGC > CP009273/65491‑65624 | cGCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCG > 1:12218297‑M1/1‑68 (MQ=255)cGCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCG > 1:12577554‑M1/1‑68 (MQ=255)cGCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCG > 1:6402919‑M1/1‑68 (MQ=255)cGCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCG > 1:16226903‑M1/1‑68 (MQ=255) gCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCgg > 1:34549852/1‑68 (MQ=255) gCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCgg > 1:1520834/1‑68 (MQ=255) aGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGt < 1:23827874/67‑1 (MQ=255) ttCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCt > 1:5190158/1‑68 (MQ=255) ttCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCt > 1:17411452/1‑68 (MQ=255) tCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCtt < 1:23231704/68‑1 (MQ=255) cGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCttt > 1:24613338/1‑68 (MQ=255) cGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCttt > 1:8109303/1‑68 (MQ=255) cGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCttt > 1:2151476/1‑68 (MQ=255) tAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTa > 1:2902213/1‑67 (MQ=255) aTTGATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAc < 1:20520940‑M2/67‑2 (MQ=255) aTTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcg > 1:25229036‑M2/1‑66 (MQ=255) aTTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAc < 1:20970759‑M2/67‑2 (MQ=255) tcatcaATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgcc < 1:2645906‑M2/68‑5 (MQ=255) tcatcaATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgcc < 1:42596501‑M2/68‑5 (MQ=255) tcatcaATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgcc < 1:20082608‑M2/68‑5 (MQ=255) tcatcaATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgcc < 1:14577429‑M2/68‑5 (MQ=255) atcaATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgccag > 1:2668797‑M2/1‑62 (MQ=255) aTTGGCGCTGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:37946575/68‑1 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:30254857/68‑1 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:1178750/68‑1 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:6667974/68‑1 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:33012890/68‑1 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt > 1:2120401/1‑68 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:7691026/68‑1 (MQ=255) aTTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgt < 1:311577/68‑1 (MQ=255) tGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgccagccggtg > 1:22878923‑M2/1‑56 (MQ=255) tGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGgtgt < 1:41143171/68‑1 (MQ=255) tGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgccagccggtgtatgg > 1:39350166‑M2/1‑50 (MQ=255) tGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGc < 1:43550909/67‑1 (MQ=255) tGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCg < 1:70205/68‑1 (MQ=255) cgggcGCGACAGTAAACGCCATACACCGGCTGGCGGCGAAAATCCAATAAcgccagccggtgtatgg > 1:6022906‑M2/2‑50 (MQ=255) gggCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAAcgccagccggtgtatggcc > 1:42396949‑M2/1‑49 (MQ=255) gcgACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGc < 1:38466300/68‑1 (MQ=255) aCAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCtt > 1:32598544/1‑68 (MQ=255) aCAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCtt > 1:36419642/1‑68 (MQ=255) aaaGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTc > 1:22310952/1‑67 (MQ=255) aaaGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTc > 1:29673816/1‑67 (MQ=255) aaaGGCCATACACCGGCTGGCGGTGAAAATCCCTTAACGCCCGCGGTGTCAGGCGAAAGCCTTg < 1:18582943/64‑1 (MQ=255) aGGCCATACACCGGCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgc > 1:37165552‑M1/1‑20 (MQ=255) aGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCAc > 1:37616390/1‑67 (MQ=255) ggCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCAc > 1:26997149/1‑66 (MQ=255) ggCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCAc > 1:28502112/1‑66 (MQ=255) ggCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCAc > 1:19758139/1‑66 (MQ=255) gCCATACACCGGCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgccca > 1:9735477‑M1/1‑18 (MQ=255) gCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCAc > 1:36658741/1‑65 (MQ=255) ccATACCCCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCAccc < 1:3003299/66‑1 (MQ=255) ccATACACCGGCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgccca > 1:35427982‑M1/1‑17 (MQ=255) ccATACACCGGCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgccca > 1:23655743‑M1/1‑17 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:7412320/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:11240739/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt < 1:13739937/67‑1 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:9511985/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:10809255/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:33514061/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt < 1:15380768/67‑1 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:9147934/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:31576512/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:39665778/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:24964447/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt < 1:8842756/67‑1 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:2208477/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:27921370/1‑67 (MQ=255) ccATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCt > 1:24387288/1‑67 (MQ=255) cATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGc < 1:10069319/68‑1 (MQ=255) cATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGc < 1:25986795/68‑1 (MQ=255) aTACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCa > 1:21864012/1‑68 (MQ=255) tACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaa < 1:43024577/68‑1 (MQ=255) acacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaa > 1:3907089/1‑68 (MQ=255) cacCGGCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgcccatcgcca > 1:35175499‑M1/1‑12 (MQ=255) cacCGGCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgcccatcgcca > 1:5025903‑M1/1‑12 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa < 1:2829157/68‑1 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:25633183/1‑68 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:8520178/1‑68 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:18880152/1‑68 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:16678698/1‑68 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:15843308/1‑68 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:4150375/1‑68 (MQ=255) cacCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCaaaa > 1:14273873/1‑68 (MQ=255) acCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAat > 1:10381309/1‑68 (MQ=255) acCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAat > 1:40780785/1‑68 (MQ=255) acCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAat > 1:19225784/1‑68 (MQ=255) acCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAat > 1:18170644/1‑68 (MQ=255) ccGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAata < 1:13240336/68‑1 (MQ=255) cGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAatat < 1:34408761/68‑1 (MQ=255) gCTGGCGttaaaggattttcaccgccagccggtgtatggcctttactgtcgcgcccatcgccaattga > 1:22511658‑M1/1‑7 (MQ=255) cTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAatat > 1:5766457/1‑65 (MQ=255) tGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTg > 1:27560145/1‑68 (MQ=255) ggCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGa < 1:40457573/68‑1 (MQ=255) ggCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGa < 1:35801333/68‑1 (MQ=255) ggCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGa < 1:29331240/68‑1 (MQ=255) ggCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGa < 1:14891213/68‑1 (MQ=255) ggTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGAgc < 1:34969717/67‑1 (MQ=255) ggTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGAgc < 1:34203166/67‑1 (MQ=255) ggTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGAgc < 1:32301447/67‑1 (MQ=255) ggTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGAgc < 1:30795772/67‑1 (MQ=255) | CGCAGGCGCTTTTCGTAATTCATCAATTGGCGATGGGCGCGACAGTAAAGGCCATACACCGGCTGGCGGTGAAAATCCTTTAACGCCAGCGGTGTCAGGCGAAAGCCTTGTTCACCCTGCAAAATATGCTGAGC > CP009273/65491‑65624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |