| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1586885 = | NA (NA) | 4 (0.010) | 4/90 | NT | NA | intergenic (‑186/+37) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog |
| ? | CP009273 | 1586916 = | NA (NA) | intergenic (‑217/+6) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog | |||||
Only 100 of 572 total aligned reads displayed.
TCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCC > CP009273/1586818‑1586952 | actaggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtat < 1:21608068‑M1/1‑1 (MQ=255)actaggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtat < 1:25260836‑M1/1‑1 (MQ=255) ccgcgatcgcggataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa > 1:1395810‑M2/16‑68 (MQ=255) CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa < 1:3987333‑M1/68‑1 (MQ=255) CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa < 1:30613520‑M1/68‑1 (MQ=255) taggtgattaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa > 1:43428024‑M1/66‑68 (MQ=255) taggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa < 1:11751048‑M1/3‑1 (MQ=255) taggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa < 1:5816254‑M1/3‑1 (MQ=255) gtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGcc < 1:21127549‑M1/6‑1 (MQ=255) gatcgcggataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGc < 1:36579193‑M2/56‑1 (MQ=255) tgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGc > 1:2781151‑M1/62‑66 (MQ=255) tgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGc > 1:8340497‑M1/62‑66 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:29368882‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:6418439‑M1/67‑1 (MQ=255) gataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGc < 1:5239227‑M1/8‑1 (MQ=255) aaaggctatagctatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:38239765‑M1/58‑68 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:10014470‑M1/11‑1 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:28870888‑M1/58‑68 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:17408240‑M1/58‑68 (MQ=255) aaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:33738303‑M1/11‑1 (MQ=255) aaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:24134562‑M1/11‑1 (MQ=255) aaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:14869370‑M1/11‑1 (MQ=255) aaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:32597053‑M1/11‑1 (MQ=255) GGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATg > 1:29634735‑M1/1‑67 (MQ=255) ataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCa > 1:1551985‑M2/4‑68 (MQ=255) taAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCa < 1:31788707‑M2/65‑1 (MQ=255) TAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCa > 1:19175491‑M1/1‑67 (MQ=255) aAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCa > 1:1159124‑M2/2‑66 (MQ=255) aaaaGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCAtct < 1:26027553/68‑1 (MQ=255) aggaggATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCg > 1:36903134/1‑67 (MQ=255) aggaggATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCg > 1:2290409/1‑67 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:17187177/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:31257720/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:25923004/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:33542474/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:24856455/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:21880426/68‑1 (MQ=255) ttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGc < 1:15220352/68‑1 (MQ=255) ttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGc < 1:30379110/68‑1 (MQ=255) tAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCt < 1:31080914/68‑1 (MQ=255) tAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCt < 1:20323569/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:35934380/68‑1 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:18902121/1‑68 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:26328662/1‑68 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:30187281/1‑68 (MQ=255) aaTAAGGCGTTGATGCGACGTTAGAAGTCGGAAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:13883725/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:13667490/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:34063727/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:17726590/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:38754929/1‑68 (MQ=255) aTAAGGCGGTGATGCGCCGTTTTAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat < 1:36166405/68‑1 (MQ=255) aaGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATAc > 1:14440089/1‑68 (MQ=255) aGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACg < 1:14569098/68‑1 (MQ=255) gTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGtt < 1:13298042/67‑1 (MQ=255) gTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGtt < 1:23305566/67‑1 (MQ=255) gTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGtt < 1:15858946/67‑1 (MQ=255) tGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTAc < 1:2009650/68‑1 (MQ=255) aTGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa > 1:42663442/1‑68 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa > 1:32314692/1‑67 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:18379829/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:3491435/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:40553435/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:29182048/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:28557235/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:1082932/68‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCGTCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:8890640/67‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCta > 1:37867174/1‑68 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:19417897/67‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:6634164/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:9038541/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:27064315/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:4318547/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:16247570/67‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:10282894/68‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:11223194/68‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:17577613/68‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:22459034/68‑1 (MQ=255) aGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCCATATTTCACt < 1:21298794/68‑1 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt > 1:12378719/1‑67 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt > 1:39096633/1‑67 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt > 1:4505773/1‑67 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt > 1:23823483/1‑67 (MQ=255) ggCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCa < 1:7575204/68‑1 (MQ=255) tatTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATg < 1:35459118/68‑1 (MQ=255) tatTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATg < 1:2075626/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTTCCAGCTATATTTCACTCCCAGCATGc < 1:32877894/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCTGCATg > 1:808486/1‑67 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATg > 1:30861482/1‑67 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:24606620/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:42118369/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:41624793/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:39557138/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:35255987/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:1281948/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:8556277/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:9479190/68‑1 (MQ=255) ttAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGcc < 1:2818634/68‑1 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGccc > 1:38510035‑M1/1‑68 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGccc > 1:37477880‑M1/1‑68 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:40852279‑M1/66‑1 (MQ=255) | TCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCC > CP009273/1586818‑1586952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |