| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 9 (0.020) | 4/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 599 total aligned reads displayed.
CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 | ccGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAg < 1:37036232/68‑1 (MQ=255)ccGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAg < 1:20915821/68‑1 (MQ=255) ttACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCgg < 1:1227896/68‑1 (MQ=255) gcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg < 1:23935417‑M1/5‑1 (MQ=255) gcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg < 1:27647614‑M1/5‑1 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:36690630‑M1/62‑67 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:2917669‑M1/62‑67 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:22077903‑M1/10‑1 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:41703870‑M1/10‑1 (MQ=255) aaCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg < 1:12779269/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCATTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgc < 1:37903406/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGGGCCCGGTAcc > 1:39997838/1‑66 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATaag > 1:23365617/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgc < 1:14897367/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgc < 1:43588970/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgc < 1:4716738/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:37650603/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:19619876/1‑67 (MQ=255) cGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgcc > 1:42307458/1‑67 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGGCGCAAAcg > 1:3223237/1‑68 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg > 1:15139173/1‑68 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg < 1:21495551/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAACCCGCaaaag > 1:25180871/1‑66 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtc > 1:37305821/1‑68 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgt < 1:16401827/67‑1 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCCCAAAcgtc > 1:20791235/1‑68 (MQ=255) tatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcg > 1:13707745/1‑68 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt > 1:34421986/1‑68 (MQ=255) gACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTAt > 1:31356976/1‑67 (MQ=255) gACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTAt > 1:599161/1‑67 (MQ=255) gACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACCTCGTAt > 1:39672635/1‑67 (MQ=255) ggCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCgg < 1:2941315/68‑1 (MQ=255) ggCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCgg < 1:17197195/68‑1 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:10370432/67‑1 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:9026702/67‑1 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:6815010/67‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:35760515/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:11441912/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:2699908/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:30526451/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:13278549/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:28322079/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:28637159/68‑1 (MQ=255) tACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATc < 1:24651862/68‑1 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAACCCGCAAACGGGGGATCCCGCATTAta > 1:31800991/1‑66 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCCGCTACGCCGCAAACGTCGTATCCGGCATTATCACAt > 1:33539357/1‑68 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca < 1:41972676/65‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCa > 1:41291850/1‑68 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:11842815/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:32446208/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:34648279/68‑1 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACAt > 1:40907216/1‑61 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCCGATAAGCCGCAAACGTCGTATCCGGCAATATCACATCAGCGCa > 1:32989224/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:38335714/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:30048062/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:8162667/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAt > 1:40229203/1‑68 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTa < 1:5144204/68‑1 (MQ=255) gcgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCAGTATGACAGCCGCGCatttg < 1:13460368‑M1/51‑2 (MQ=255) cgctgatgtgataatGCCGGATACGCCGCACACGTCGTATCCGGCATTATCACCTGAGCGCATTTAcc < 1:27385026‑M1/53‑1 (MQ=255) cgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTAcc < 1:16665457‑M1/53‑1 (MQ=255) tACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCa > 1:20360623/1‑68 (MQ=255) tACGGTAACGGCGAGCCCGATACGCCGCAAAGGGCCGATCCGGCATTATCACATCAGCGCATTTTCCa > 1:18580746/1‑68 (MQ=255) aCGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTTTGCGGGATTATCACCACAGCGGATTTAACAg > 1:1986868/1‑68 (MQ=255) cGGTAACGGCGAGCCGGTTACCCCGCCAAAGGCGTTTCCGGGATTATAACATCAGCGCATTTTACAgg > 1:30817040/1‑68 (MQ=255) cGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAg > 1:35416546/1‑67 (MQ=255) gTAACGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg > 1:10128427/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCggg > 1:3607569/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7224749/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:6534882/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:43373526/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:948378/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:39536750/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:14536163/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:36352918/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15329936/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15667949/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:31543854/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:2787382/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15998083/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:1831217/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:25813261/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:19173801/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACATCAGCGCATTTACCAGGCGGt > 1:22378572/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATCACATAAGCGCATTTACCAGGCGGt > 1:7034225/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACCTAGTTTCCGGCATTATCAAATAAGCGCAATTAACAGGCGGt > 1:8048608/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCC‑CAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:39062998/67‑1 (MQ=255) aaCGGCGAGCCGGATAACCCGCAAACGGCGTTTTCGGCATTTTCACATAAACGGATTTTCCCCGCGGt > 1:11637599/1‑68 (MQ=255) aaCGGCGAGCCGGAGACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18807337/68‑1 (MQ=255) aaCGGCGAGCCCGCTTAGCCCCCAACGACGTATCCCGCCTTTTCACATCAGCGCATTTAACACGCGGt > 1:40734942/1‑68 (MQ=255) aaCGGCGAGCCCGATAAGCCCCAAAAGTCGTATGCGGCATTATCACAAAAGCGCATTTTCCAGGGGGt > 1:38714237/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCTGCATTATCACATCAGCGCATTTACCAGGCGGTAtt < 1:23601157/68‑2 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:5518480/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:33881704/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:7568053/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:34943372/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGGATg > 1:26153187/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt > 1:42544679/1‑68 (MQ=255) gAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt < 1:42942718/67‑1 (MQ=255) gAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt < 1:8572120/67‑1 (MQ=255) | CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |