| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 541 (1.030) | 22 (0.050) | 9/90 | NT | 5.4% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 340 (0.800) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 780 total aligned reads displayed.
ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 | aCGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAg < 1:4328957/68‑1 (MQ=255) cGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTTGCGGAAGGCGCCgg > 1:23900122/1‑68 (MQ=255) cGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAgg > 1:39901674/1‑68 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:35972059/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:22220156/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:32880129/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:16688620/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:38322044/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:5092459/68‑1 (MQ=255) ggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGt > 1:34921472/1‑68 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:22729219‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:28036375‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:34261733‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGt < 1:12912205‑M1/4‑1 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:40319047‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:26374189‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:42101181‑M1/64‑68 (MQ=255) gCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGt < 1:26019856/67‑1 (MQ=255) cGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggggt < 1:20206534/67‑3 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:9790545/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:21075234/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:36139645/67‑1 (MQ=255) atatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCag > 1:18001114/1‑68 (MQ=255) atatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCag > 1:36571995/1‑68 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:15102606/68‑1 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:24640921/68‑1 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:15522477‑M1/10‑1 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:24279732‑M1/10‑1 (MQ=255) tCGCGTTTAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGc < 1:34472832/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAACCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:13262183/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:37584057/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:33462304/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:31892616/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:30343810/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:665602/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:42520149/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:16338791/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:10259716/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:14361988/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:15700374/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:17703521/68‑1 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:7309876/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:17019619/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGAAGGGTTTGCaga > 1:33789230/1‑64 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:3932623/1‑68 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:19550144/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:25051152/67‑1 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:43527459/1‑68 (MQ=255) aaCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:18401245/1‑67 (MQ=255) aaCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:17274840/1‑67 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAg > 1:37346230/1‑63 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:26992443/1‑66 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:2931807/1‑66 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:39072873/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:31338086/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:23054657/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:41713187/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:9425256/68‑1 (MQ=255) aCTCACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:21390194/68‑1 (MQ=255) cTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCt < 1:18941054/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:32390642/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:14746407/68‑1 (MQ=255) aaaCGGCAAAAAGAGCGTCTGGTCGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAc < 1:30868831/68‑1 (MQ=255) aaaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAc < 1:30552183/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:6900965/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:31664398/68‑1 (MQ=255) acgagcatttcaatcgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgag < 1:540774‑M1/39‑1 (MQ=255) aaaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGga < 1:21881974/67‑1 (MQ=255) aacagagCGGCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:9070422/65‑1 (MQ=255) aaaaTAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:42913742/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:27646849/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:38709546/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:10663091/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:41058119/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:28374104/68‑1 (MQ=255) aaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:11471199/1‑68 (MQ=255) agagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa > 1:8651309/1‑68 (MQ=255) agagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa > 1:7965704/1‑68 (MQ=255) agagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa > 1:6150727/1‑68 (MQ=255) agCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaaa > 1:8387564/1‑68 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:3556556/67‑1 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:12652483/67‑1 (MQ=255) tGGTAGCGGAAGGCGCAGGGTTTTCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGAt < 1:11885818/68‑1 (MQ=255) gTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTg > 1:20761893/1‑68 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaa > 1:25637384/1‑68 (MQ=255) gCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaaa > 1:13929393/1‑68 (MQ=255) gAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:29026025/1‑66 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAACCCCCGGAGATTAAAAGCGATTGAAATGc > 1:40748829/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:29678271/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:16058702/67‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:2330994/68‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:35171247/68‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:33247421/68‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:23632607‑M1/62‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTGAAGCAGTCTGCAAACCCCGGAGATTATAAGCGATTGAAATGCTCg < 1:2000205‑M1/62‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:10008225/66‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:4634946/67‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:378078/67‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:37136932/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:17437842/67‑1 (MQ=255) | ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |