New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3622650 =695 (1.320)29 (0.060) 8/96 NT 5.5% coding (249/2736 nt) rbbA ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein
?CP009273 3622682 = 407 (0.900)coding (217/2736 nt) rbbA ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein

Only 100 of 619 total aligned reads displayed.

CCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTC  >  CP009273/3622615‑3622749
                                                                   |                                                                   
  gcgtcattgaacagggcaatgtgatggtgctgggcggcgatatgcgcgacccgaagcatcgccgcCCa                                                                   <  1:34860191‑M2/3‑1 (MQ=255)
    gCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 <  1:40271425/68‑1 (MQ=255)
    gCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 <  1:6304304/68‑1 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:29310886/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:21034936/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:4448694/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:30564003/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:6808592/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:9402951/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:31590025/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:8983218/1‑67 (MQ=255)
     cGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGc                                                                 >  1:33410503/1‑67 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:30074894/67‑1 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:38707381/67‑1 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:35110579/67‑1 (MQ=255)
      ggCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCa                                                                <  1:42618364/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:52284/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:34085220/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:18314487/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:16761613/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:39844250/67‑1 (MQ=255)
        cATCCAGGCGATGCGCGGGCAGACGTCGCGGCGAAGCTTCGGGTCGCGCATATCGCCGCCCAGCAcc                                                              <  1:2549075/67‑1 (MQ=255)
         aTCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCAt                                                            <  1:10855723/68‑1 (MQ=255)
          tCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATc                                                           <  1:810858/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:35914405/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:27032035/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:21633222/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:33003547/68‑1 (MQ=255)
            cAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATcac                                                         <  1:43270648/68‑1 (MQ=255)
              ggCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAt                                                       >  1:18621531/1‑68 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:23180874/1‑67 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:14502704/1‑67 (MQ=255)
                cGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:27495161/1‑67 (MQ=255)
                cGATGCGCGCGCAGAAGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACAtt                                                      >  1:15833781/1‑67 (MQ=255)
                 gcaatgtgatggtgctggGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTg                                                     <  1:24016145‑M1/49‑1 (MQ=255)
                 gATGCGCTGGCAGACGTCGCGGCGATTCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:13715446/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:16978297/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:32224449/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:7636899/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:1223452/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:28748192/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:20414612/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:36586112/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:25191548/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:39389483/68‑1 (MQ=255)
                 gATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGc                                                    <  1:22271184/68‑1 (MQ=255)
                    gcgcGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCt                                                 <  1:12751366/68‑1 (MQ=255)
                    atgtgatggggctgggcggcgatatgcgcgacccgaagcatcgccgcCCAGCACCATCACATTGCCCt                                                 <  1:14055402‑M2/21‑1 (MQ=255)
                      gtgatggtgctggGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCCCATTGCCCTGt                                               <  1:19262977‑M1/55‑1 (MQ=255)
                      gtgatggtgctggGCGGCGATGCTTAGGGTCGCGGATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:5081711‑M1/55‑1 (MQ=255)
                      gtgagggggctgggcggcgatatgcgcgacccgaagcatcgccgcCCAGCACCATCACATTGCCCTGt                                               <  1:25609039‑M2/23‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:3447986/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:41139381/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:32536642/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:29157017/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:7346684/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:41443170/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:37959418/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:35628751/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:42039977/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:3917944/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:14912830/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:12583904/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:23550811/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:13058422/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:11909583/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:11252347/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:26824817/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGGCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:5720729/68‑1 (MQ=255)
                      gcgGGCAGACGTCGCGGCGATGCTTCGGGGCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:3633842/68‑1 (MQ=255)
                      gcgGGCAGACGGCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGt                                               <  1:40580218/68‑1 (MQ=255)
                         ggCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCa                                            >  1:24264501/1‑68 (MQ=255)
                           ggtgctggGCGGCGCTGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAAt                                          <  1:29929752‑M1/60‑1 (MQ=255)
                           ggtgctggGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCCCATTGCCGTGTTGAAt                                          <  1:33697874‑M1/60‑1 (MQ=255)
                             tgctggGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATg                                         <  1:26638184‑M1/61‑1 (MQ=255)
                                tggGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGAcgc                                     <  1:10022277‑M1/65‑1 (MQ=255)
                                   GCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCggg                                  >  1:27177202‑M1/1‑68 (MQ=255)
                                   GCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCgg                                   >  1:26066779‑M1/1‑67 (MQ=255)
                                     GGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGc                                 <  1:8268515‑M1/67‑1 (MQ=255)
                                      GCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCa                                <  1:26187039‑M1/67‑1 (MQ=255)
                                        GATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCAcc                              >  1:29574233‑M1/1‑67 (MQ=255)
                                           gCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGaa                          >  1:38370713/1‑68 (MQ=255)
                                             ttCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAAt                        <  1:18848296/68‑1 (MQ=255)
                                                gggTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCa                      >  1:13389327/1‑67 (MQ=255)
                                                 ggTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAAc                    >  1:36984007/1‑68 (MQ=255)
                                                  gTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGCCGCGGGCACCGGAAATCAACg                   >  1:853493/1‑68 (MQ=255)
                                                  gTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAAc                    <  1:19660992/67‑1 (MQ=255)
                                                  gTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACg                   >  1:17878573/1‑68 (MQ=255)
                                                        cATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGacaaca             >  1:30869987/1‑68 (MQ=255)
                                                        cATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACACGGGCACCGGAAATCAACGacaaca             >  1:11491018/1‑68 (MQ=255)
                                                         atatCGCCGCCCAGCACCATCACATTGCCGTGTTCAATGACGCGGGCACCGGAAATCAACGAcaacaa            >  1:24881547/1‑68 (MQ=255)
                                                         atatCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGAcaacaa            <  1:15289711/68‑1 (MQ=255)
                                                         atatCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGAcaacaa            <  1:3201113/68‑1 (MQ=255)
                                                            tcgcggcCCATCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCt         <  1:10621365‑M2/61‑1 (MQ=255)
                                                               ccgcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCg       >  1:10323280‑M2/5‑67 (MQ=255)
                                                               ccgcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCg       >  1:21254807‑M2/5‑67 (MQ=255)
                                                               ccgcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCg       >  1:28002712‑M2/5‑67 (MQ=255)
                                                               ccgcCCAGCACCATCACATTGCCCTGTTCAAGGACGCGGGCACCGGTAATGAACGAGAACAAGcgcg       >  1:28511057‑M2/5‑67 (MQ=255)
                                                                 gcCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACt    >  1:31112176‑M2/3‑68 (MQ=255)
                                                                  cCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGAcaacaa            <  1:1561003‑M2/58‑1 (MQ=255)
                                                                   |                                                                   
CCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCAGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTC  >  CP009273/3622615‑3622749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.