| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4034088 = | NA (NA) | 16 (0.040) | 7/94 | NT | 100% | intergenic (+92/+178) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | CP009273 | 4034093 = | 0 (0.000) | intergenic (+97/+173) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
Only 100 of 911 total aligned reads displayed.
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAG > CP009273/4034028‑4034160 | ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:36992820‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:38781525‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:19017791‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:8132257‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggc < 1:16659490‑M2/2‑1 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgg < 1:27836817‑M2/1‑1 (MQ=255) tatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcgg < 1:25913550‑M2/4‑1 (MQ=255) tatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcgg < 1:41700107‑M2/4‑1 (MQ=255) gtggcgggcgtcctgcccgccaccctccgggccgttgcgtcgcaacgttcaaatacgctcccgGCGGa > 1:13242569‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:4354062‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:18179669‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:19453717‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:43325078‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:20347807‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:21030436‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:2972038‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:23250649‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:36639849‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:4012338‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:28583990‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:27015963‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:30595317‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:8891408‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:11090013‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:16127593‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:31668160‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:5748647‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:11904148‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:14592572‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:33864770‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:1400166‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgctacgcaacgttcaaatccgctcccgGCGGa < 1:12840579‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccggtgcttcgcaacgttcaaatccgctcccgGCGGa < 1:28313254‑M2/5‑1 (MQ=255) atggcgggcggcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:17868662‑M2/5‑1 (MQ=255) atggcgggcggcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:11495983‑M2/5‑1 (MQ=255) tggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAt > 1:24868772‑M2/63‑68 (MQ=255) tggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAt > 1:1507501‑M2/63‑68 (MQ=255) ggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAtt > 1:34367019‑M2/62‑68 (MQ=255) ggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAtt > 1:12518135‑M2/62‑68 (MQ=255) ggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAtt > 1:31148027‑M2/62‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgccacgttcaaatccgctcccgGCGGAttt > 1:4226037‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGGttt > 1:6099110‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:36143621‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:35595950‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:3484593‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:42641711‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:33417357‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:37934712‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:38429969‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:39038066‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:39688012‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:40671550‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:41005333‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:41913214‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:9374866‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:43081042‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:4664910‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:4948664‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:5282293‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:7227835‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:8581258‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:10130830‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:17535064‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:2302306‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:32760879‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:22400460‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:22123280‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:21638000‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:20669752‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:19884160‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:18725204‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:22809483‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:17151714‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:15758322‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:15534545‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:13512003‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:12146601‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:10755945‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:10435936‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:28901633‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:32572107‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:32329631‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:31938887‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:23525225‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:27345456‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:26280564‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:24541644‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:24079579‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:23859434‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggcagttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:26854054‑M2/61‑68 (MQ=255) ctggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:3027725‑M2/8‑1 (MQ=255) cgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:14260648‑M2/8‑1 (MQ=255) cgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:6698094‑M2/8‑1 (MQ=255) cgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:39299551‑M2/8‑1 (MQ=255) cgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGATTTg > 1:25178187‑M2/60‑68 (MQ=255) acaaatccgctcccgGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgc < 1:13824604‑M2/51‑1 (MQ=255) tccgctcccgGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAt > 1:37429351‑M2/11‑68 (MQ=255) tcccgGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATaa > 1:29197946‑M2/6‑65 (MQ=255) tcccgGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATaa > 1:29914901‑M2/6‑65 (MQ=255) GCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg > 1:7600366‑M2/1‑68 (MQ=255) | GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAG > CP009273/4034028‑4034160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |