| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 608 (1.150) | 22 (0.050) | 11/90 | NT | 5.3% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 304 (0.720) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 672 total aligned reads displayed.
AGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGC > CP009273/4375125‑4375259 | gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:28148455/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:23160917/67‑1 (MQ=255) gCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTaa < 1:41370102/67‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:7567471/68‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:8932720/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTTTCGTCTACCTGCCGATAGGGCGTAAAGACa < 1:33635615/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:12759714/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:13211088/68‑1 (MQ=255) tggtgtcatccataacatttcctgtctttacgccctatcgtcaggtagacgatagggcGTAAAGACa < 1:30776067‑M2/9‑1 (MQ=255) aTCCGCAGTTGGCGGTTTAATAACCCGATGCCCTATCGTCTTCCTGAGGATAGTGCGTAAAGACAGGa < 1:4414655/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa > 1:31370088/1‑68 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATTCCCTATCTGCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:30950909/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:8132354/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:21046343/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:25158649/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:36472260/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:40042856/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:9404973/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:27860489/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:2896317/68‑1 (MQ=255) catccataacatttcctgtctttacgccctatcgtcaggtagacgatagggcGTAAAGACAGGAAAt < 1:33168427‑M2/15‑1 (MQ=255) aGTGGGCTTTTGAATAACCCTATGGCCTATCGTCTACCTTACGATATTGCGTATAGACAGGAAATGt < 1:28704577/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:10100028/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:21730708/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:19510016/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:37890628/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:42758763/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:43062570/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:3464799/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:146380/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:15945663/67‑1 (MQ=255) gTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGtt < 1:16420090/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:7143148/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGa > 1:38524995/1‑68 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGa > 1:22428064/1‑68 (MQ=255) acatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGAt < 1:15562549‑M1/51‑1 (MQ=255) gTGGAATAACCCGATGCCCTATCGTCTAACTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg > 1:25413413/1‑67 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg < 1:3045754‑M1/52‑1 (MQ=255) ttcctgtctttccgccctatcgtcaggtagacgatagggcGTAAAGACAGGAAATGTTATGGATGaca < 1:5566208‑M2/28‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac > 1:1800073/1‑67 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:5912400/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:12147002/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGc < 1:17135639/68‑1 (MQ=255) ctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg < 1:24092365‑M1/62‑1 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGCCACCAGCCg > 1:20700300/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:32739040/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:36808767/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:18613681/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:42621599/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:22018296/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGCCGATAGGGCGTAAAGCCAGGAAATGTTATGGAGGCCACCAGCCgg > 1:27096944/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:13614283/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:8572551/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:16193277/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:2047481/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:28400441/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:4967654/1‑68 (MQ=255) CCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCg < 1:35523137‑M1/68‑1 (MQ=255) CCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCg < 1:26110211‑M1/68‑1 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:35088278‑M1/1‑68 (MQ=255) CCTATCGTCAACATGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:20189458‑M1/1‑68 (MQ=255) CTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGc > 1:35781500‑M1/1‑68 (MQ=255) CTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGc > 1:11791582‑M1/1‑68 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:38174322‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:43499041‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:39185862‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:31876429‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:5810064‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:29317756‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:36310712‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCAGGGACCCGGCAATa < 1:27394761‑M1/68‑1 (MQ=255) CGTCTACCGGACGATAGGGCGTAAAGACAGGTATTGTTATGGATGACACCAGCCGGGACCCGGGAATa < 1:6544302‑M1/68‑1 (MQ=255) GTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:182140‑M1/67‑1 (MQ=255) GTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:40567810‑M1/67‑1 (MQ=255) GTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:25679734‑M1/67‑1 (MQ=255) TCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATaa < 1:27612761‑M1/67‑1 (MQ=255) TCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACAAGCCGGGACCCGGCAATaa < 1:33975244‑M1/67‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc > 1:9692737‑M1/1‑68 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc > 1:41616102‑M1/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:26704692/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:41123376/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:39594405/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:37140149/1‑68 (MQ=255) tGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGa < 1:32446921/68‑1 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGatgga < 1:23545411‑M2/60‑3 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa > 1:10551326‑M2/9‑68 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa < 1:38873053‑M2/60‑1 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa < 1:24823725‑M2/60‑1 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa < 1:15263234‑M2/60‑1 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa < 1:11458539‑M2/60‑1 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa > 1:29952610‑M2/8‑68 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa > 1:24613906‑M2/8‑68 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa > 1:14075202‑M2/8‑68 (MQ=255) tagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa < 1:30691135‑M2/61‑1 (MQ=255) tagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa < 1:17551779‑M2/61‑1 (MQ=255) tagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa < 1:11037240‑M2/61‑1 (MQ=255) agggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATc > 1:1445970‑M2/6‑68 (MQ=255) ggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAg > 1:42136530‑M2/4‑68 (MQ=255) gcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATg < 1:19189301‑M2/58‑1 (MQ=255) gTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGgc < 1:5222708/68‑1 (MQ=255) | AGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGC > CP009273/4375125‑4375259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |