New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 904473 =258 (0.490)16 (0.030) 6/98 NT 6.6% coding (278/1002 nt) ltaE L‑allo‑threonine aldolase, PLP‑dependent
?CP009273 904511 = 229 (0.500)coding (240/1002 nt) ltaE L‑allo‑threonine aldolase, PLP‑dependent

Only 100 of 467 total aligned reads displayed.

GGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTG  >  CP009273/904446‑904577
                                                                 |                                                                  
ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCt                                                                   >  1:39992939/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:32569159/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:18405510/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:16848713/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:20413981/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:16097004/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:21413019/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:28543195/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:3127522/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:33916228/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:40425651/1‑67 (MQ=255)
 gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg                                                                  >  1:41575175/1‑67 (MQ=255)
      ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGAc                                                            <  1:12588561/68‑1 (MQ=255)
      ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGAc                                                            <  1:12450394/68‑1 (MQ=255)
      ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGAc                                                            <  1:34172724/68‑1 (MQ=255)
      gaagagtatattgtcggtcaggccgcgcataactatctgtttgaagccggtggcgcggcCTGACCGAc                                                            <  1:13486247‑M2/9‑1 (MQ=255)
      gaagagtatattgtcggtcaggccgcgcaaaactatctgtttgaagccggtggcgcggcCTGACCGAc                                                            <  1:21975774‑M2/9‑1 (MQ=255)
      gaagagtatattggcggtcaggccgcgcataactatctgtttgcagccggtggcgcggcCTGACCGAc                                                            <  1:24045274‑M2/9‑1 (MQ=255)
       gTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACa                                                           >  1:38303294/1‑68 (MQ=255)
         tGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACaa                                                          <  1:10665604/67‑1 (MQ=255)
         tGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACaa                                                          <  1:26089485/67‑1 (MQ=255)
           gtatattgtcggtcaggccgcgcataactatctgtttgaagccggtggcgcggcCTGACCGACAat                                                         <  1:8445066‑M2/12‑1 (MQ=255)
           gtatattgtcggtcaggccgcgcataactatctgtttgaagccggtggcgcggcCTGACCGACAat                                                         <  1:27690293‑M2/12‑1 (MQ=255)
             tACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     <  1:14126618/68‑1 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGCCCGACAATTTAc                                                     >  1:6229838/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:24335028/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:1949950/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:38618536/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:14539684/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:2981468/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:14362881/1‑67 (MQ=255)
              aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc                                                     >  1:27367325/1‑67 (MQ=255)
               attgtcgggcaggccgcgcataactatctgtttcaagccggtggcgcggcCTGACCGACAATATActc                                                   <  1:40983878‑M2/18‑1 (MQ=255)
                 gCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct                                                  >  1:1755941/1‑67 (MQ=255)
                 gCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct                                                  >  1:22581774/1‑67 (MQ=255)
                 gCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct                                                  >  1:37406350/1‑67 (MQ=255)
                  gtcggtcagGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc                                                <  1:3609235‑M1/59‑1 (MQ=255)
                  gtcggtcagGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc                                                <  1:9597299‑M1/59‑1 (MQ=255)
                  cccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc                                                >  1:30256700/1‑68 (MQ=255)
                   ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGCCAATATACTCTTc                                                >  1:19647742/1‑67 (MQ=255)
                   ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc                                                >  1:40247259/1‑67 (MQ=255)
                   ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc                                                >  1:3883303/1‑67 (MQ=255)
                   ccAGAACCGCCGCGCCACCCGCTTCAAACAGATAGTTATGCGCGGCCTGACAGACAATATACTCTTc                                                >  1:37121553/1‑67 (MQ=255)
                        aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg                                          >  1:36513049/1‑68 (MQ=255)
                        aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg                                          >  1:43607233/1‑68 (MQ=255)
                        aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg                                          >  1:19434956/1‑68 (MQ=255)
                        aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg                                          >  1:28242853/1‑68 (MQ=255)
                           GCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTc                                       <  1:1922756‑M1/68‑1 (MQ=255)
                             CGCGCCACCGGCTTCAATCAGATAGTTATGCGCGGCCTTACCGACAATATACTCTTCGCCGCGTTCg                                      >  1:33613951‑M1/1‑67 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCg                                      >  1:3212050‑M1/1‑67 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCg                                      >  1:13752851‑M1/1‑67 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc                                     <  1:4126443‑M1/68‑1 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc                                     <  1:5355485‑M1/68‑1 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc                                     <  1:6839368‑M1/68‑1 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc                                     <  1:9437537‑M1/68‑1 (MQ=255)
                             CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc                                     <  1:14859480‑M1/68‑1 (MQ=255)
                              GCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCa                                    >  1:19908189‑M1/1‑68 (MQ=255)
                                GCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGt                                  <  1:37911211‑M1/68‑1 (MQ=255)
                                  cACCTGCTTCAAACAGATAGTTATGCGCGGCCTGAGCGACAATATACTCTTCGCCGCGTTCGCAGTg                                 <  1:20072140/67‑1 (MQ=255)
                                      ggCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGa                            <  1:4907413/68‑1 (MQ=255)
                                        cTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGc                          >  1:7453560/1‑68 (MQ=255)
                                              aCAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCg                    >  1:23445658/1‑68 (MQ=255)
                                              aCAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCg                    >  1:11924753/1‑68 (MQ=255)
                                                  aTAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCa                >  1:30948909/1‑68 (MQ=255)
                                                  aTAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCa                >  1:40601217/1‑68 (MQ=255)
                                                   tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGa                   <  1:25711268/64‑1 (MQ=255)
                                                   tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGa                   <  1:39336706/64‑1 (MQ=255)
                                                   tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg               <  1:15414072/68‑1 (MQ=255)
                                                   tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg               <  1:22363637/68‑1 (MQ=255)
                                                   tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg               <  1:42482953/68‑1 (MQ=255)
                                                    aGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAgg              >  1:29261576/1‑68 (MQ=255)
                                                    aGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAgg              >  1:23833286/1‑68 (MQ=255)
                                                    aGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAgg              >  1:5563473/1‑68 (MQ=255)
                                                     gTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGt             >  1:12267988/1‑68 (MQ=255)
                                                      ttATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGtt            >  1:8827840/1‑68 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:35167937/1‑68 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:16455371/1‑68 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           <  1:18956108/68‑1 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:8110220/1‑68 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:6012310/1‑68 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:43373762/1‑68 (MQ=255)
                                                       tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:2701160/1‑68 (MQ=255)
                                                        aTGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg           >  1:11581093/1‑67 (MQ=255)
                                                          gcgcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTgg          >  1:35294352‑M2/8‑66 (MQ=255)
                                                          gcgcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTgg          >  1:11167993‑M2/8‑66 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGCCTGAGCAGAGCGACCAGGTTGGCCTg      >  1:43017365‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:27981127‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:34877373‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:15694295‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:33416619‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:25256231‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:10050251‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:23250797‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:26390588‑M2/6‑68 (MQ=255)
                                                            gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg      >  1:13023421‑M2/6‑68 (MQ=255)
                                                            gcgccCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGCCCAGGTTGGCCTg      >  1:289453‑M2/6‑68 (MQ=255)
                                                              ggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGa     <  1:7826883‑M2/64‑1 (MQ=255)
                                                              ggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGa     <  1:20984122‑M2/64‑1 (MQ=255)
                                                                cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt   >  1:6426405‑M2/2‑67 (MQ=255)
                                                                cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt   >  1:18164346‑M2/2‑67 (MQ=255)
                                                                 |                                                                  
GGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTG  >  CP009273/904446‑904577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.