| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 629 (0.900) | 40 (0.070) | 13/96 | NT | 7.1% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 509 (0.850) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 160 total aligned reads displayed.
AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA > CP009273/3999197‑3999263 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:28114722/1‑68 GATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:12595528/1‑67 GATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:42217036/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACCGGCGCTATTTTCAGC > 1:26995655/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGTCGCTATTTTCAGC > 1:22709321/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:10388652/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:32810909/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:35249524/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC < 1:35464893/67‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:37654326/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC < 1:26313145/67‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:24591635/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:23721561/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:23390513/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:43303722/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:9173438/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:57552653/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:15139074/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:55381797/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:55267943/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCAGAAATAAAAACAGGCGCTATTTTCAGC > 1:12847132/1‑67 TCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACCGGCGCTATTTTCAGCGC < 1:48304683/68‑1 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:28335661/1‑66 CAACACTACCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCAATTTTCAGCG > 1:46224044/1‑66 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG < 1:17076019/68‑1 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG < 1:1810968/68‑1 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG < 1:42833944/68‑1 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:23213368/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:30143029/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:29599371/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:34241691/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:48478221/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:30975462/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:7454692/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:10102751/1‑67 CACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGT < 1:25712405/68‑1 acaTCCGCCTGCGCCACATTGACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTT < 1:17926647/65‑1 TCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGC > 1:30518332/1‑60 CGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTAT < 1:41507958/68‑1 TGCGCCACATTCACCCCGATTGCCTCAAATAAAAACAGCCGCTATTTTCAGCGCCTGTTTTTATTTCA < 1:24377531/68‑1 GCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGG < 1:31797463/67‑1 CACATTCACCCCTATTGCCTGAAATAAAAACCGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:52812061/67‑1 CACATTCACCCCGATTGCCTTAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:14882066/67‑1 CACATTCACCCCGATTGCCTGAAATAAAACCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:18776431/67‑1 CACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:21390759/67‑1 CACATACACCCCGATTGCCTGAAATAAAAACACGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:13871777/67‑1 TTCTCCCCGATTGCCTGAAATAAAAACACGGGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGG < 1:7760118/68‑1 TTCACCCCGATTGCCTGAAATAATAACAGGCGCTATTTTCAGCGCCTGTTTCTATTTCAGGCAATCGG < 1:26718663/68‑1 TTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGG < 1:44313945/68‑1 TCACCCCGATTGCCTGAAATAAACCCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:31587744/68‑1 TCACCCCGATTGCCTGAAATAAAAACCCGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:18698549/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:57043045/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:47704856/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:19575031/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTATCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:33406547/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGCCGCTATTTTCACCGCCTGTTTTTATTTCAGGCAATCGGG < 1:48706033/68‑1 TCACCCCGATTGACTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:50190101/68‑1 CACCCCGATTGCCTGAAATAAACCCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:33311559/68‑1 CACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:9613658/68‑1 CACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:21639182/68‑1 CACCCCGATTGCCTGAAATAAAAACACGCGCTATTTTCCGCGCCTGTTTTTATTTCAGGCAAGCGGGG < 1:19590956/68‑1 CCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAG > 1:39482054/1‑37 CCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAA < 1:3589526/68‑1 TTGCCTGAAATAAAAACAGGCGCTATTTTCCGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTG < 1:49838222/68‑1 TTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTG < 1:11957415/68‑1 GCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAA < 1:23309938/67‑1 AGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCC > 1:27518958/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:31117407/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:5255825/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:25631329/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:40653948/1‑68 GCGCCTGTTTGTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:18879245/1‑68 CGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGG > 1:20848360/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGTTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:41569067/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGACTCTGGAGTCCGGA < 1:3857669/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:8354574/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:6542244/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:5775957/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:17143094/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:29531010/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:51354825/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:29041554/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:37122881/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:36631237/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:2829886/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:19521215/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:27159022/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:41265546/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:49588323/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:44354160/68‑1 CCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:6543904/1‑67 CTGTTTTTATTTCAGGCAGTCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:12978137/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:44662625/68‑1 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:12277118/68‑1 CTGTTTTTAATTCAGGCAATCGGGGTGAATGGGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:15309603/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:30953702/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:9233262/68‑1 GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA < 1:14429691/68‑1 GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA < 1:3557617/68‑1 GTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA < 1:48854730/68‑1 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA > CP009273/3999197‑3999263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |