| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4548792 = | 568 (0.810) | 13 (0.020) | 6/94 | NT | 2.8% | coding (552/1173 nt) | iadA | isoaspartyl dipeptidase |
| ? | CP009273 | 4548838 = | 422 (0.720) | coding (506/1173 nt) | iadA | isoaspartyl dipeptidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 138 total aligned reads displayed.
TGGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4548867‑4548792‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcagaaCGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > CP009273/4548838‑4548904 TGGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGG < 1:54721791/68‑1TGGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGG < 1:5117692/68‑1 GGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGC > 1:53543339/1‑68 GGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGC > 1:39934218/1‑68 GCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG > 1:38674709/1‑68 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:27599983/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:4124998/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:52778693/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG > 1:28540110/1‑67 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:28755882/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:17458372/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:17172520/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:54981790/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:30141046/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:13381332/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:38893349/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:22953129/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:4321167/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:37707787/67‑1 CGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCG < 1:1041061/67‑1 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC < 1:25741472/68‑1 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC > 1:44517052/1‑68 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC < 1:26178065/68‑1 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC < 1:41680080/68‑1 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC < 1:29467451/68‑1 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC > 1:38550748/1‑68 GTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGC < 1:7891190/68‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCTGACGTTTATCACCTGGCCAATATGGCGGCAGAA < 1:12549213/68‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:29590991/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA < 1:37910680/68‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:36766996/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:47126835/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA < 1:11932648/68‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:2343366/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:6607472/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:51981299/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA < 1:17784225/68‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:17654687/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:12848288/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:16084436/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:5682650/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA < 1:57932376/68‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA > 1:57821827/1‑68 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGA < 1:25399040/67‑1 AATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGA < 1:42870309/67‑1 ATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAAC < 1:11030529/68‑1 GCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGG < 1:40596593/68‑1 GCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGG < 1:7616148/68‑1 CGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGG < 1:57350727/67‑1 GCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTG < 1:3482251/68‑1 GCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTG < 1:35679732/68‑1 GCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTG < 1:25726734/68‑1 GCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGT < 1:15543883/67‑1 CATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTGA < 1:25802718/67‑1 CATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTGA < 1:28799900/67‑1 CATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTGA < 1:34518924/67‑1 CATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCAGCAGAACGGTGA < 1:12453679/67‑1 CATCTCTGATCACCGTTCTGCCCCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTGA < 1:34479098/67‑1 TCTGATCACCGTCCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTGATCAGA < 1:30504621/68‑1 CACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAACGGTGATCAGAGATGGC < 1:49716935/68‑1 ACCGTTCTGCCGCCCCGGACGTTTATCACCTGGCCAATAGGGCGGCAGAACGGTGAGCAGAGATGGC < 1:15918689/67‑1 CGTTCTCCCGCACCGTACGTTAATCCCCTGCCCAATATGGCGGCACAACGGTGATCAGAGATGGCGCA < 1:6329087/68‑1 TCACCTGGCCAATATGGCGGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGA < 1:39266959/68‑1 ggGGCGGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTC < 1:332786/66‑1 GCGGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTT > 1:17101912/1‑68 GCGGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTT > 1:19995772/1‑68 GCGGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTT < 1:22635637/67‑1 GCGGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTT < 1:41071000/67‑1 GGCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTT > 1:11151237/1‑67 GCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTT > 1:5235346/1‑67 GCAGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTT > 1:326686/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:20540874/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:56862075/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC < 1:183969/67‑1 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:12853636/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:49953022/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:14680512/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:48913040/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:22096016/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:46302075/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:46275617/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:6593837/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:44792022/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC < 1:42469183/67‑1 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:28116624/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:40551857/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:29548922/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:38501617/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCC > 1:3807651/1‑67 AGAACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCATATTCC > 1:32834789/1‑67 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:35360580/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:10217627/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:14850562/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:50778389/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:5022464/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:45669789/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:23017695/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:10020051/1‑68 ACGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCA < 1:17677755/65‑1 ACGGTGATCAGAGATGGAGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > 1:38110697/1‑68 TGGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4548867‑4548792‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcagaaCGGTGATCAGAGATGGCGCATTTCACGCCAATCACACGATCGATAATCGCCACGTCTTTTTCCACGG > CP009273/4548838‑4548904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |