| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4548792 = | 568 (0.810) | 13 (0.020) | 6/94 | NT | 2.8% | coding (552/1173 nt) | iadA | isoaspartyl dipeptidase |
| ? | CP009273 | 4548838 = | 422 (0.720) | coding (506/1173 nt) | iadA | isoaspartyl dipeptidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 715 total aligned reads displayed.
TTTTACTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCATT > CP009273/4548725‑4548859 | ccgtggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgt > 1:10020051‑M1/68‑68 (MQ=255) ggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCt > 1:46275617‑M1/64‑67 (MQ=255) ggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCt > 1:28116624‑M1/64‑67 (MQ=255) ggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCt > 1:16274182‑M1/64‑67 (MQ=255) ggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCt > 1:13985204‑M1/64‑67 (MQ=255) ggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCt > 1:57560304‑M1/64‑67 (MQ=255) ggaaaaagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCt > 1:40551857‑M1/64‑67 (MQ=255) aCTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGGGGGATTCt > 1:41190541/1‑67 (MQ=255) aCTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCt > 1:55354460/1‑67 (MQ=255) aCTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCt > 1:42929130/1‑67 (MQ=255) aCTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCt > 1:31553330/1‑67 (MQ=255) aCTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCt > 1:20432377/1‑67 (MQ=255) aCTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCt > 1:51712387/1‑67 (MQ=255) tGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCTGGATTCTgcc > 1:30386478/1‑68 (MQ=255) tGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTgcc > 1:53707499/1‑68 (MQ=255) gTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTgcc > 1:26936355/1‑67 (MQ=255) gTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTgcc > 1:52315274/1‑67 (MQ=255) aagacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTCTgccgc < 1:22635637‑M1/9‑1 (MQ=255) gCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCa < 1:55694212/68‑1 (MQ=255) gacgtggcgattatcgatcgtgtgattggcgtgaaatgcgccatctctgatcaccgTTctgccgcccc < 1:332786‑M1/12‑3 (MQ=255) cccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat > 1:26307286/1‑68 (MQ=255) cccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat > 1:53008489/1‑68 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCata > 1:22249499/1‑68 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:28525960/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:45794937/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:1178701/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:49882379/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:50360446/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:32654535/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:17545383/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:21864690/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:6756177/67‑1 (MQ=255) ccATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCat < 1:18528869/67‑1 (MQ=255) aTGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATAtt > 1:43501927/1‑68 (MQ=255) gtgGTACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTgg < 1:19456612/68‑1 (MQ=255) gtgGCACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTgg < 1:20783946/68‑1 (MQ=255) gtgGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTg > 1:25840150/1‑67 (MQ=255) ggAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGcc > 1:10663126/1‑68 (MQ=255) ggAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGcc > 1:23939077/1‑68 (MQ=255) ggAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGcc > 1:51209022/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg > 1:46504155/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg > 1:18757657/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg < 1:15368010/68‑1 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg > 1:54628242/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg > 1:8007886/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg < 1:1144934/68‑1 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg < 1:39972398/68‑1 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg > 1:3903623/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg > 1:38224340/1‑68 (MQ=255) acacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATGCTGCCGCCATATTGGCCAgg < 1:45539950/68‑1 (MQ=255) acacGGGGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAgg < 1:38494086/68‑1 (MQ=255) cacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGt < 1:49020200/68‑1 (MQ=255) cacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGt < 1:40285920/68‑1 (MQ=255) cacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGt < 1:36079849/68‑1 (MQ=255) cacGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGt > 1:33048820/1‑68 (MQ=255) acGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTg > 1:16965031/1‑68 (MQ=255) acGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTg > 1:50834387/1‑68 (MQ=255) acGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTg > 1:48572354/1‑68 (MQ=255) acGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTg > 1:44394850/1‑68 (MQ=255) acGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTg > 1:33854453/1‑68 (MQ=255) gACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATaa > 1:7255407/1‑67 (MQ=255) cGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACg < 1:42314075/68‑1 (MQ=255) gCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACg > 1:37989007/1‑67 (MQ=255) gCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACg > 1:39543947/1‑67 (MQ=255) cAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTcc > 1:11986431/1‑68 (MQ=255) cAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTcc > 1:27186612/1‑68 (MQ=255) gTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGt > 1:5717198/1‑68 (MQ=255) tttACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGt > 1:13375171/1‑67 (MQ=255) tttACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGt > 1:41041145/1‑67 (MQ=255) tttACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGt > 1:34763348/1‑67 (MQ=255) tACCGCCGAGCAAACCGCCAACGCGGGATTCCGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCg < 1:8719000/68‑1 (MQ=255) ccgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGGGGc > 1:31969494/1‑68 (MQ=255) ccgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGc < 1:35624242/68‑1 (MQ=255) ccgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGc > 1:41875734/1‑68 (MQ=255) cgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCa > 1:31018904/1‑68 (MQ=255) cgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCa > 1:5630901/1‑68 (MQ=255) cgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCa > 1:47136700/1‑68 (MQ=255) cgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCa > 1:19923452/1‑68 (MQ=255) cgccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCa > 1:35167083/1‑68 (MQ=255) gccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAg > 1:9303724/1‑68 (MQ=255) gccgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAg > 1:1274613/1‑68 (MQ=255) cgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGa < 1:34451/67‑1 (MQ=255) cgAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGa < 1:44885412/67‑1 (MQ=255) gAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAAc < 1:14720102/68‑1 (MQ=255) gAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAAc < 1:24839869/68‑1 (MQ=255) tgcgccatctctgatcaccgTTGTGCCGCCATATTGGGCAGGGGATTAACGTACGGTGCGGGAGAACg < 1:6329087‑M1/48‑1 (MQ=255) aaaCCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTg < 1:48151199/68‑1 (MQ=255) aaaCCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTg < 1:29067600/68‑1 (MQ=255) aaCCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGa < 1:18126405/68‑1 (MQ=255) aaCCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGa < 1:25503918/68‑1 (MQ=255) aCCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGAt < 1:37407975/68‑1 (MQ=255) cgcgGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATg > 1:57927065/1‑68 (MQ=255) tcaccgTTCTGCTGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATg < 1:12453679‑M1/61‑1 (MQ=255) tcaccgTTCTGCCGCCATATTGGCCAGGTGATAACCGTCCGGTGCGGCAGAACGGTGGTCAGAGATg < 1:49658599‑M1/61‑1 (MQ=255) gggATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGgc < 1:15091663/67‑1 (MQ=255) aTTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCAt > 1:15855568/1‑68 (MQ=255) TTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCAtt > 1:5682650‑M1/1‑68 (MQ=255) TTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCAtt > 1:2343366‑M1/1‑68 (MQ=255) TTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCAtt > 1:29590991‑M1/1‑68 (MQ=255) TTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCAtt > 1:36766996‑M1/1‑68 (MQ=255) | TTTTACTGTCGCCCATGTGGAACACGGTGACGCCAGGTTTACCGCCGAGCAAACCGCCAACGCGGGATTCTGCCGCCATATTGGCCAGGTGATAAACGTCCGGTGCGGCAGAACGGTGATCAGAGATGGCGCATT > CP009273/4548725‑4548859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |