| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4603949 = | 490 (0.700) | 5 (0.010) | 4/94 | NT | 1.3% | coding (652/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4603980 = | 342 (0.580) | coding (683/780 nt) | yjjV | putative DNase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 397 total aligned reads displayed.
CATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4604024‑4603949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA > CP009273/4603980‑4604046 ATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:10416781/1‑68 ATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG < 1:20418453/68‑1 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGCACACACGGGCAGCCTGCTCCGGGCGGGTAG > 1:10002373/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:21356172/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:30317170/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:16244857/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:353572/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:15048418/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:4144368/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:52254254/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG > 1:10883896/1‑66 CCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGACTGGTCCGGGCGGTTAGGg > 1:51817197/1‑67 CGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCT < 1:38185063/68‑1 CGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGGTAGGCT < 1:6104114/68‑1 GCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCT > 1:54494129/1‑67 GCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCT > 1:22782661/1‑67 GCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCACACTGCTCCGGGCGGGTAGGCT > 1:17542830/1‑67 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC < 1:50596803/68‑1 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC < 1:12317710/68‑1 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC < 1:3189808/68‑1 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC < 1:28116962/68‑1 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC < 1:25856125/68‑1 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGC > 1:35052654/1‑67 CGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGC < 1:15789679/67‑1 TTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCG < 1:29463563/67‑1 CCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCTGTGT < 1:44922244/67‑1 gCGCAAAGCAGGGCGAACCCACGGGCAGCCTGCTCCGGGCGGAAAGGCGGCCCGTGTGGTCGCCGTGC < 1:32270539/67‑1 AGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAG < 1:12807177/66‑1 AGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAG < 1:39120513/66‑1 GGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGT > 1:37100364/1‑68 GCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:49315100/1‑68 GCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:40252916/1‑68 GCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:53699660/1‑68 GCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:54081731/1‑68 GCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAGTGCGCAAGCGTT > 1:56208449/1‑68 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGat > 1:19222795/1‑65 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:47191389/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:46985367/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:43133373/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT < 1:45635585/67‑1 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:6887909/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:3515096/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT < 1:17002352/67‑1 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:13530682/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:33795921/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT < 1:51040938/67‑1 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:51415054/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:6298652/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT < 1:56892345/67‑1 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:31504575/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT < 1:31035289/67‑1 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:28670201/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:54934223/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT > 1:26248516/1‑67 CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTT < 1:40617755/67‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCTCCGGGTACCGGCTTATGAGATTGCGCAAGCGTTGC < 1:47443308/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGTTGAGATTGCGCAAGCGTTGC < 1:19509820/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:42775364/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:44255069/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:21628561/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:48127784/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:53318092/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:55516456/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:11696347/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:729719/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:8735745/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:42563869/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:268953/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:27564019/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:28309492/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:29037234/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:18476376/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:23462000/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:32713145/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:19935248/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:35689081/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:22327988/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:36305065/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:36675798/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:22113493/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:20954556/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:39607864/68‑1 TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:1471739/68‑1 TGCCCGTGTGTGCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:34204312/68‑1 TGCCCGTGTGTGCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC < 1:14360904/68‑1 CCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTT > 1:48524890/1‑68 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:25097901/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:9041379/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:17864247/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:33175640/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:36080851/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:46388539/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA < 1:41822536/68‑1 CCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTT < 1:12074992/67‑1 CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA < 1:519559/68‑1 CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA > 1:24338912/1‑68 CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA < 1:23921498/68‑1 CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA > 1:57476774/1‑68 CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA < 1:7728022/68‑1 CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA > 1:15486296/1‑68 CATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4604024‑4603949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA > CP009273/4603980‑4604046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |