| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1092949 = | NA (NA) | 36 (0.060) | 10/100 | NT | 23.7% | intergenic (+664/+72) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | CP009273 | 1093045 = | 130 (0.190) | noncoding (64/88 nt) | serX | tRNA‑Ser | |||||
Only 100 of 387 total aligned reads displayed.
TAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGccccga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1093016‑1092949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC > CP009273/1093045‑1093116 TAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:9081640/68‑1 acAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTCTATTGCACACACCGGGGGGATGAGAAGC < 1:1594439/66‑1 acAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:57291172/66‑1 AAAGAAGAGCTCGTAGGAAAGTACTGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:46203521/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAAGC < 1:16539871/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:41444753/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:30869725/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:18820908/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:38915945/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:28910419/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:29756481/68‑1 AAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC < 1:23447235/68‑1 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAAGCCC < 1:46037920/68‑1 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCag > 1:34281312/1‑66 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:55804647/68‑1 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:34991308/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:36627608/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:26240238/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:1561468/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:43400833/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:4516901/1‑67 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:11749345/1‑67 AGAACAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:53356296/68‑1 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTTTATTTCACACACCGGGGGGATGAGAAGCCCC > 1:6407828/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTTTATTGCACACACCGGGGGCAACAGAAGCCCC > 1:52697942/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCTGGGGGATAAGAAGCac > 1:13404001/1‑65 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCac > 1:31321202/1‑65 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:33932477/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:36382081/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:53837267/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:49181464/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:3677922/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:38268958/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:50199119/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:29579505/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:40304318/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:40778821/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:47547464/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:42528564/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:44805272/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:45701020/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:46806188/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:46997846/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:20395057/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:10255031/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9549973/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:12428680/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:13706146/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:1404270/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:15097496/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:17835003/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:6684368/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:32411485/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:20974942/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:21453444/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:24028415/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:2449861/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:54560066/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:29968692/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:28529431/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:28122230/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:27523116/1‑68 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCCTGGGTATTAGAAGCC > 1:11497564/1‑66 GAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGAATATTGCACACACCGGGGGGATGAGAAGCCC > 1:856087/1‑67 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGTGGGATGAGAAGCACCG > 1:47865579/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:31804087/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:14497825/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:4432844/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:35828388/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:26911881/1‑68 AAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:52157897/1‑67 agtGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:16717105/65‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:51329787/68‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:7660490/67‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:11031144/67‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:39458520/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:17179337/67‑1 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:33681449/1‑67 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:57841582/1‑64 AGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGCATGAGAAGCCCCG > 1:48569510/1‑67 AGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGccc > 1:33181677/1‑65 GCTCGTACGTAAGTACGGGCGTTTTTTTCGTATATCGCACACACCGGGGGGATGAGAAGCCCCGAT < 1:56350977/66‑1 CTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:58109738/64‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:49559750/67‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:19634268/67‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:37907637/67‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:21838873/67‑1 ACGAAAGTACGGGCTTTTTTTTCGTATATTCCCCACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:20254503/67‑1 ACGAAAGAACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:12162976/67‑1 CGAAAGTACGGGCTTTTTTTTCGTATATTCCACACCCCGGGGGGATCACAAGCCCCGATACGTTGCCG < 1:13004810/68‑1 GAAAGAACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGCCGT < 1:25653269/68‑1 TTTTTTTTCTAATATTGCACACACCGGGGGGATCAGAAGCCCCGATACGTTGCCGTATACACACTTT < 1:32822733/67‑1 TTTTTTTTCGTATATTGCACACCCCGGGGGGATGAGAAGCCCCGATACGTTGCCGTATACACACTTT < 1:55087537/67‑1 TTTTTTTTCGAAAATTCCACACCCCGGGGGCATGACAAGCCCCGATACGTTGCCGTATACACACTTT < 1:42131854/67‑1 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT < 1:35341216/68‑1 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT > 1:50741989/1‑68 CCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATT < 1:22543456/68‑1 CCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATT < 1:38663023/68‑1 CCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTG < 1:39242029/68‑1 GATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC < 1:22997482/68‑1 TAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGccccga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1093016‑1092949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC > CP009273/1093045‑1093116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |