| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1685627 = | 349 (0.500) | 22 (0.040) | 11/88 | NT | 7.4% | intergenic (+10/+216) | ydgA/uidC | DUF945 family protein/putative outer membrane porin for beta‑glucuronides porin protein |
| ? | CP009273 | 1685659 = | NA (NA) | intergenic (+42/+184) | ydgA/uidC | DUF945 family protein/putative outer membrane porin for beta‑glucuronides porin protein | |||||
Only 100 of 203 total aligned reads displayed.
CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1685704‑1685627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggcgttttCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC > CP009273/1685659‑1685725 CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTC > 1:2336211/1‑67CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTC > 1:45101097/1‑67 cAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:43167784/2‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:51879536/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:35884885/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:52754919/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:45516127/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:56347768/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:37203257/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:40276171/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:31659523/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:9678196/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:41242633/1‑67 AAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGC > 1:28002089/1‑68 AAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGC < 1:3480348/68‑1 AAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGC > 1:52819950/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:24263638/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG < 1:47383403/68‑1 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:6000278/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:6639232/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:1006149/1‑68 AGCGTAGCGCATCAGCCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:17734951/1‑68 GCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGT > 1:54120226/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:33057918/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:32226506/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:10210412/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:30092072/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:41599125/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:41695044/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:42838930/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:46521056/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:53567738/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:55602565/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:57716901/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:58006506/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:7827252/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:8857888/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:29564116/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:20393134/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:21044729/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:19314295/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:23727704/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:14315037/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:25083052/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:13417619/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:1197024/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:28307919/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:29946287/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:17993475/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:11762023/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGT < 1:14999153/66‑1 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCCTTT > 1:51391773/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTATTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:49721036/1‑68 GTAGCGCATCAGGCAATCTCTCGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTAACCGGCGTTT > 1:44152905/1‑68 CAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAA < 1:39778244/68‑1 CAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAA < 1:44399508/65‑1 agCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAACATCTCCGGCGTTTTCATCTGAAAACAAA < 1:43616536/66‑1 ATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAA < 1:7084911/68‑1 CTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACC < 1:8556959/68‑1 CTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACC < 1:54079754/68‑1 TTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGA < 1:48059481/67‑1 TTTGATTTCAGATGAAAACGCCGGAGTCAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGA < 1:22109869/67‑1 TTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGAT < 1:22640622/67‑1 GAAAAATCTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGG < 1:42426963/66‑1 cgCTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCT < 1:56057070/66‑1 CTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:15196586/1‑68 CTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:6817390/1‑68 CTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:10788940/1‑68 TCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT < 1:57326440/68‑1 TCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT < 1:5340406/68‑1 TCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:17431150/1‑67 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:14830200/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:10658192/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:13621813/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:6282568/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:7631359/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:51053466/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:37836239/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:50302439/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:26855289/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:40973295/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:27887258/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:52211242/68‑1 tttGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT > 1:28860221/4‑65 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:1662199/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:54280746/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:34023685/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:20848704/68‑1 CGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGC > 1:48471585/1‑68 TCATCTGAAAACAACCCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAAC > 1:15758048/1‑66 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:24432943/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:33527791/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:36563546/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:25850732/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:39221386/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:21512629/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:46963533/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:54926056/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:49814472/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAAC > 1:29510187/1‑66 CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1685704‑1685627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggcgttttCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC > CP009273/1685659‑1685725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |