| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2694210 = | 449 (0.640) | 21 (0.040) | 8/90 | NT | 6.5% | coding (148/381 nt) | acpS | holo‑[acyl‑carrier‑protein] synthase 1 |
| ? | CP009273 | 2694239 = | 241 (0.430) | coding (119/381 nt) | acpS | holo‑[acyl‑carrier‑protein] synthase 1 | |||||
Only 100 of 240 total aligned reads displayed.
TGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2694286‑2694210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCG > CP009273/2694239‑2694305 TGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGG > 1:57668901/1‑68TGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGG > 1:17453416/1‑68TGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGG > 1:48738765/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:8133245/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:28208703/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:30025965/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:25626566/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:33052452/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:2519176/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:35546052/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:35959885/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:37593955/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:2140512/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:40438873/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:40637634/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:43382226/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:53864406/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT < 1:12128438/68‑1 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:57018375/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:6125567/1‑68 GATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:5972796/1‑68 GATCGCCTGGCACGCCGCGTATTAAGAGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:33666094/1‑68 ATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGT > 1:20108628/1‑67 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGC > 1:17242418/1‑68 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGC > 1:27417527/1‑68 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGC < 1:32802165/68‑1 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTG < 1:50327387/67‑1 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTG < 1:29039156/67‑1 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTG < 1:34316804/67‑1 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTG < 1:22347842/67‑1 TCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTG < 1:39492046/67‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT < 1:56221585/68‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT < 1:7228754/68‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT < 1:5251584/68‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT < 1:10511967/68‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT < 1:28994033/68‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT < 1:14505478/68‑1 GCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGT > 1:18957156/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:28105219/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:10263000/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:30453965/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:53247261/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:49489769/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:47031988/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:45263484/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:43476166/1‑68 CCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:22607919/1‑68 CCTGGCACGCCGCGTAATAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT > 1:48574611/1‑68 CTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT < 1:9435654/68‑1 CTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT < 1:51920505/68‑1 CTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT < 1:22167022/68‑1 CTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT < 1:22883523/68‑1 CTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT < 1:26489032/68‑1 CTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTT < 1:56730753/67‑1 GGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT > 1:20517162/1‑66 GGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT > 1:4246265/1‑66 GCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT > 1:24097966/1‑65 GCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT > 1:53520297/1‑65 GCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTT > 1:41744665/1‑65 ACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCCA < 1:38481413/67‑1 AAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCCAGATAGCCCATTCG < 1:32615628/68‑1 TAACGAATGGGCTATCTGGAAAACGCCCCACCAGCCGGTGCGTTTTCCAGATAGCCCATTCGTTATCG < 1:27586170/68‑1 TAACGAATGGGCTATCTGGAAAACGCACCCCCAGCCGGTGCGTTTTCCAGATAGCCCATTCGTTATCG < 1:39721937/68‑1 TAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCCAGATAGCCCATTCGTTATCG < 1:19627009/68‑1 AACGAATGGGCTATCTGGAAACCGCACCACCAGCCGGGGCGTTTTCCAGATAGCCCATTCGTTATCGC < 1:45631591/68‑1 AACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCCAGATAGCCCATTCGTTATCGC < 1:18344399/68‑1 AACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCCAGATAGCCCATTCGTTATCGC < 1:57283309/68‑1 TCTGGAAAACGCACCACCAGCCGGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCG < 1:8340589/68‑1 GGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGG > 1:58077929/1‑68 GGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGG > 1:23500142/1‑68 GGTGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGG > 1:40083318/1‑68 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:24808393/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:28496068/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:55046310/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:19777165/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:3152140/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:52586852/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:32429161/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:25603412/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:51244406/67‑1 TGCGTTTTCCAGATAGCCCATTCGTTAGCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGG < 1:45418247/67‑1 GCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCG < 1:34680216/68‑1 GCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCG > 1:53324760/1‑68 GCGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGC < 1:41451166/67‑1 CGTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGA > 1:38882023/1‑68 GTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGA > 1:548275/1‑67 GTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGA > 1:38030865/1‑67 GTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGA < 1:4441152/67‑1 GTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGA < 1:15304093/67‑1 GTTTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGA > 1:3585489/1‑67 TTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATC < 1:42934360/67‑1 TTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATC < 1:16314997/67‑1 TTTCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATC < 1:13099950/67‑1 TCCAGATAGCCGATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC < 1:11398487/68‑1 TCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC < 1:31423983/68‑1 TCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC < 1:14090685/68‑1 TCCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC < 1:51602160/68‑1 CCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC > 1:12497179/1‑67 CCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC > 1:13848198/1‑67 CCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACC > 1:31703503/1‑67 TGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2694286‑2694210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgttttcCAGATAGCCCATTCGTTATCGCTTAATACGCGGCGTGCCAGGCGATCACCGGATCGGGCGATCACCG > CP009273/2694239‑2694305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |