| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2845465 = | 421 (0.600) | 45 (0.080) | 13/96 | NT | 8.6% | coding (243/273 nt) | hypC | hydrogenase maturation protein |
| ? | CP009273 | 2845525 = | 600 (1.000) | coding (31/1122 nt) | hypD | hydrogenase maturation protein | |||||
Only 100 of 146 total aligned reads displayed.
CTGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2845539‑2845465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA > CP009273/2845525‑2845590 CTGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAG > 1:10226022/1‑68 TGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC < 1:8041650/68‑1 TGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC < 1:5776170/68‑1 TGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:51269961/1‑68 TGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC < 1:35476155/68‑1 GCATCACCTGTTCCGGCGCGCGATATTCATGAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:24340275/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:41709419/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:23588941/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:25296302/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:30425708/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:33617468/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:38873596/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:12276128/1‑67 GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:7553966/1‑67 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAACCGCATTATTTTTCCTCGCCATACAACAGCGC > 1:52219566/1‑67 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACCACAGCGCG < 1:5711759/68‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:36424351/68‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:28190468/68‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:21177434/68‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:1846733/68‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:12753745/68‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC < 1:15887071/67‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:21497029/1‑67 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:21985615/1‑67 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC < 1:54565368/67‑1 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:51489392/1‑67 ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCATCGCCATAAAACAGCGC > 1:21421198/1‑67 TCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:44231790/68‑1 TCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:16094060/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:12659918/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:28670900/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:27952429/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:45510071/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:39359683/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:49488522/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:50676429/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:51620009/68‑1 CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:56512581/68‑1 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:38642399/1‑68 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:54866490/1‑68 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:1095285/1‑68 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:42055194/1‑68 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:29751341/1‑68 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:40231248/1‑68 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC > 1:45768992/1‑67 ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC > 1:41722852/1‑67 CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:26529584/68‑1 CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:49100647/1‑67 CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:38174826/1‑67 CTGTTCCGGCGCGCGATATTCATCAACAAACCGCATTTTTTTTCCTCGCCATACAACAGCGCGCCG > 1:20566013/1‑66 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:5432531/68‑1 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:10454368/68‑1 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:54171107/68‑1 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:52422845/68‑1 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:27096183/68‑1 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:21278973/68‑1 CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:35766666/1‑66 TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:50024657/68‑1 TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:41241617/68‑1 TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:44784948/68‑1 CGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCTCCATACACCAGCGCGCCGGAACAGGT < 1:4764637/68‑1 CGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGT < 1:56393925/68‑1 CGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGT < 1:10063676/68‑1 GGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTG > 1:7496016/1‑68 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:42591625/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:14147032/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:41972173/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:25438677/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACACCGCGCCGGAACAGGTGATGCAG < 1:44163424/67‑1 GATATTCAACAACAAAACGCATTATTTTTCCTCGCCATACAACCGCGCGCCGGAACAGGTGATGCAG < 1:12239758/67‑1 GATATACATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:4753998/67‑1 GATAATCATCAACAAAACCCATTATTTTTCCTCGCCAAACACCAGCGCGCCGGAACAGGTGATGCAG < 1:27828443/67‑1 taaTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTA < 1:24683638/65‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:47273358/67‑1 ATTCATCAACAAACCGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAA < 1:25575686/68‑1 ATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAA < 1:12120376/68‑1 TTCATCAACAAACCCCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAAT < 1:23814224/68‑1 TCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATT < 1:8944722/68‑1 ATCAACAAAACGCATTATTTTTCCTCGCCATACAACCGCGCGCCGGAACAGGTGATGCAGTTAATTGA < 1:17975976/68‑1 ATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGA < 1:31324724/68‑1 ATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGA < 1:22836286/68‑1 CAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGC < 1:13524657/68‑1 TTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCT < 1:57454080/68‑1 atAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTAC > 1:20614941/3‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCCCATCTCTCTTACACC > 1:46767321/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC < 1:5699040/68‑1 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC < 1:25266107/68‑1 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:15404649/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:37292490/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTC > 1:6543702/1‑52 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:21837294/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:44640805/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:11830948/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:55460514/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:31376320/1‑67 GCGCAGGAACAGGTGTTGCAGTTAATTTAGCATCTGAGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:7827597/68‑1 GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG < 1:1121529/68‑1 GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG < 1:33449575/68‑1 CCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGA > 1:28808269/1‑68 CGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA < 1:36508082/68‑1 CTGCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2845539‑2845465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA > CP009273/2845525‑2845590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |