| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3202572 | 454 (0.650) | 29 (0.050) | 10/92 | NT | 8.2% | coding (1190/1464 nt) | ttdT | L‑tartrate/succinate antiporte |
| ? | CP009273 | = 3202615 | 274 (0.480) | coding (1233/1464 nt) | ttdT | L‑tartrate/succinate antiporte | |||||
Only 100 of 122 total aligned reads displayed.
AGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202496‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAGT < CP009273/3202615‑3202549 AGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTT < 1:7741815/68‑1 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:28313414/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:31731649/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:31905792/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:25582967/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:32208504/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:2460935/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:32908196/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:3427342/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:21178887/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:1936038/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:30747964/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:17620786/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:16497355/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:4502194/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:45377884/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:28081028/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:7209466/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:29925846/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:5363319/1‑67 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:13254922/1‑67 CGGTTATTCGCCAACAATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:51667307/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGC < 1:39619172/68‑1 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:32049479/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:18562138/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG < 1:1976125/67‑1 ATTCGCCCACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:16288306/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTTGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:14971755/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:3259397/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:53756693/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:45443135/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTCCGCCAGC < 1:7352043/68‑1 ATTCGCCAACGATGGTGATGGGGGCGTTGATGGTGGTGGTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:18107135/68‑1 TTCCCCAACGATTGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCG < 1:10730572/68‑1 TCGCCCAAGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTATTCGCCAGCGC < 1:12392779/68‑1 TCGCCAACGATGGTGATGGTGGCGTTGTTTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC < 1:29757943/68‑1 TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC < 1:30784554/68‑1 CGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCA < 1:46629107/68‑1 GTGCTGGGGGCTTTGATTGTGGTGTTTTATCAACTCCGCTACTTTTTCGCCAGCGCAGCAGCAATCA < 1:34395481/67‑1 GGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGT < 1:110681/67‑1 GATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAG < 1:43129072/68‑1 GGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGG < 1:29634843/68‑1 ATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCC > 1:6421555/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCCGCAGCAAGCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:34917187/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGCGCGGAGGTATACGCCGT > 1:15385792/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:27347290/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:30627792/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:36424714/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:13758860/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:37993817/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:28421407/1‑68 ACTGCGCTACTTTTTCGCCAGCGCCGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:41729757/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGCGCGGAGGTATACGCCGTG > 1:14703978/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:56014006/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:13480854/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:39108925/1‑67 GCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGC > 1:46748107/1‑66 GCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGAATACGCCGTGGC > 1:50763947/1‑66 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTG > 1:57271987/1‑68 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTG > 1:1341007/1‑68 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTG > 1:28941718/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:3567175/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:46074676/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:33638771/1‑68 TTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAA > 1:8265326/1‑68 CGCCAGCGCAGCAGCTATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:55020437/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:30291577/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:45767095/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:32829662/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:1672023/1‑68 GCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:5068606/1‑68 CCAGCGCAGGAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAATAAGTAG > 1:41328094/1‑68 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:13168530/1‑67 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:51165729/1‑67 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:26084775/1‑67 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:11386988/1‑67 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:36305129/1‑67 GCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC > 1:33816870/1‑68 CGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCA > 1:2681042/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:56973824/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:57016628/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:27333287/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:29080611/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:57779430/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:28574390/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:27151082/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:25724738/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:46870829/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:18582258/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:22287127/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:15979243/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:16251839/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:4333365/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:21462634/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:5164738/66‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:2485104/66‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:46479736/66‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:12967929/66‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:21345872/66‑1 CAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAGT > 1:33016010/1‑68 AGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202496‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAGT < CP009273/3202615‑3202549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |