| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3701790 = | 183 (0.260) | 16 (0.030) | 4/88 | NT | 12.0% | intergenic (‑725/+186) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | 3701955 = | 91 (0.170) | intergenic (‑890/+21) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 158 total aligned reads displayed.
GCGCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701868‑3701790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagcctgctcGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAAC > CP009273/3701955‑3702021 GCGCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGA > 1:6395860/1‑68 GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTTTCTAGTAATCCTCTATCACCGACCAAATTCGAAA < 1:51313083/68‑1 GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCATATTCGAAA > 1:38393356/1‑68 GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAA > 1:45425426/1‑68 CCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAA > 1:19665859/1‑68 CCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAA > 1:18981296/1‑68 CCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAA > 1:15051118/1‑68 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:10270345/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:38933604/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:17807333/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:38998479/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:39549035/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:19926842/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:37568174/68‑1 GCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG > 1:13941895/1‑66 CAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG > 1:6122059/1‑65 AACGGCCCGCAGGGCGAGCGACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTG < 1:55884686/68‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTG < 1:55205513/68‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTG < 1:56757242/68‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT < 1:52433463/67‑1 AACGGCCCGCAGGGCGAGCCACGAAGGGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT < 1:45258087/67‑1 agGGCCCGCATGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:54405861/66‑1 agGGCCCGCAGGGCGATCCACGAAGTTGCTAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:18614171/66‑1 ACGGGCCGCAGGGCGAGCCAGGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:47024233/68‑1 ACGGCCCTCAGGGCGATCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:9474181/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:20754249/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:53291998/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:23715465/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT > 1:36845873/1‑66 CGGCTCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC > 1:13594992/1‑67 CGGCCCGCATGGCTAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCT < 1:44191563/68‑1 CGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCT < 1:16062307/68‑1 GGCCCGCAGGGCGAGCGACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC < 1:3470674/68‑1 GGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC < 1:40659909/68‑1 GGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC < 1:5002672/68‑1 GGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC < 1:32565133/68‑1 GGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCGTTGGGGAGGCTTTTCGAATTTGG > 1:10658732/1‑68 GGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCGGTGAGCCGGCGTTTGGAATTTGG > 1:8643411/1‑68 cgAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGT < 1:39071656/66‑1 AATCCTCTATCACCGCCCAAATTCGAAAAGCCTGCGCGTGGAGCAGGCTTTTCGAATTTGGTCGGT < 1:35909889/66‑1 CACCGACCAAATTCGAAAAGCCTGCGCGTTGAGGAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTC > 1:1597537/1‑68 ACCGACCAAATTCGAAAAGCCTGGTCGTTGAGCAGGCTTTTGGAATTTGGTCGGTGATAGAGGATTCG > 1:16021492/1‑68 ACCGACCAAATTCGAAAAGCCTGCTGGTTGGGCGGGGTTTTCGAATTTGGTGGGTGTTAGAGGATTCG > 1:40540870/1‑68 ACCGACCAAATTCGAAAAGCCTGCTGGGTGAGCAGGGTTTTGGAATTTGGTCGGTGATAGAGGTTTac > 1:56968429/1‑66 ACCGACCAAATTCGAAAAGCCTGCTCGTTGCGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCG > 1:25489079/1‑68 ACCGACCAAATTCGAAAAGCCTGCTCGTTGAGCAGGGTTTTCGAATTTGGTCGGTGATAGAGGTTTg > 1:32539222/1‑66 ACCGACCAAATTCGAAAAGCCTGCGCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGTTAGAGGATTCG > 1:46441221/1‑68 ACCGACCAAATTAGAAAAGCCTGCTCGTTGCGCCGGCGTTTCGAATTTGGTCGGTGATAGAGGGTTCG > 1:49245907/1‑68 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:22651983/1‑67 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:57748719/1‑67 AAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTC > 1:44726106/1‑68 AGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:1466157/1‑68 AGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:38406330/1‑68 GCCTGCTCGTTGAGCAGGCTTTTCGATTTTGGTCGGTGATAGAGGATTCGAACTTCCGCCCCCTTCG > 1:222375/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGCACCTCCGACCCCTTCG > 1:30065440/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGCCCCCTTCG > 1:8675302/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGATCCCTTCG > 1:11542/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:9777033/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:43573939/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:43669915/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:6244674/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:12519578/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:3909406/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:26881821/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:33664692/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:34365646/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:34912394/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:10094912/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:35312200/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:30687449/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:41273211/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:1475787/1‑67 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTC < 1:12326061/67‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTC > 1:46511906/1‑67 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTC > 1:15250271/1‑67 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:15297911/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:24566301/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:26049230/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:8131735/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:26092239/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:39558389/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:28611168/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:29006837/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:1692384/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:15756602/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:19425955/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:9338210/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:37528183/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:24414370/66‑1 CTGCTCGTTGAGCAGACTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:48064050/66‑1 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG < 1:46544151/68‑1 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG < 1:28045741/68‑1 CTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGA > 1:13995850/1‑68 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:45487820/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:26651803/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:44971040/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGA > 1:23504365/1‑67 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGA > 1:45267114/1‑67 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGA > 1:37639649/1‑67 CGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAAC > 1:38597640/1‑68 GCGCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701868‑3701790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagcctgctcGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAAC > CP009273/3701955‑3702021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |