| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 66560 = | 537 (0.770) | 3882 (9.140) +CGTTTTTTTGGATGGAGGAATT |
57/68 | NT | 90.8% | intergenic (‑28/‑314) | araD/araC | pseudogene, truncated/ara regulon transcriptional activator; autorepressor |
| ? | CP009273 | = 3509273 | 760 (1.090) | intergenic (‑1/+106) | dam/damX | DNA adenine methyltransferase/cell division protein that binds to the septal ring | |||||
Only 100 of 7694 total aligned reads displayed.
TGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGATAAA > CP009273/66493‑66627 | acttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacggg > 1:30674256‑M1/67‑68 (MQ=255) acttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacggg > 1:2056828‑M1/67‑68 (MQ=255) acttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacggg > 1:16582859‑M1/67‑68 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccataaatacgGGt < 1:3800021‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:39471281‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:29161592‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:25174223‑M1/3‑1 (MQ=255) gtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGt < 1:24073354/67‑1 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTAt < 1:57423861‑M1/5‑1 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTAt < 1:58012283‑M1/5‑1 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTAt < 1:31834902‑M1/5‑1 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccagccaaaaaaacgGGTAt < 1:7815660‑M1/5‑1 (MQ=255) gccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATg > 1:2968488‑M1/63‑68 (MQ=255) gccccctgcccacttcaaaaaagcgcgagttttcttcatgaattcctccatccaaaaaaacgGGTATg < 1:14623387‑M1/6‑1 (MQ=255) ccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATgg < 1:12615738‑M1/7‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATgg > 1:42268913‑M1/61‑67 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga > 1:40591351‑M1/61‑68 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga < 1:26130854‑M1/8‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga > 1:10005116‑M1/61‑68 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga < 1:41728732‑M1/8‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga < 1:7296552‑M1/8‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga > 1:34979037‑M1/61‑68 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga > 1:43924778‑M1/61‑68 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga < 1:945975‑M1/8‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttaatgaattcctccatccaaaaaaacgGGTATGga < 1:35949199‑M1/8‑1 (MQ=255) ccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGgag > 1:18957201‑M1/60‑68 (MQ=255) cctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaataaaacgGGTATGgaga < 1:53073419‑M1/10‑1 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:32287464‑M1/58‑68 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:14075626‑M1/58‑68 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:43311980‑M1/58‑68 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:55315379‑M1/58‑68 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:27662974‑M1/58‑68 (MQ=255) cctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaacgGGTATGGAGaa > 1:44526476‑M1/58‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:51009194‑M1/56‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:4619436‑M1/56‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:47243597‑M1/56‑68 (MQ=255) gcccacttcaaaaaagcgcgatctttcttcatgaattcctacctccaaaaaaacgGGTATGGAGAAAc > 1:53645010‑M1/56‑68 (MQ=255) cccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa < 1:15106304‑M1/14‑1 (MQ=255) cccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa < 1:5165535‑M1/14‑1 (MQ=255) cccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa < 1:52636881‑M1/14‑1 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:23025129‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:54117914‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:21023342‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:19507453‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:18484971‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:42786957‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAg > 1:45141966‑M1/54‑68 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAg < 1:45634792‑M1/15‑1 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAg > 1:22043087‑M1/54‑68 (MQ=255) cacttcaacaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGATAAACAGt > 1:28259312‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:48350982‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:17607332‑M1/53‑68 (MQ=255) tcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTagag < 1:32837948‑M1/20‑1 (MQ=255) gTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTagag > 1:38966405/1‑68 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:56871355‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:1097606‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:13585532‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:17053472‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:19936493‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:21498855‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:33384524‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:26599253‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:47746150‑M1/24‑1 (MQ=255) aaagagcgatttttcttcatgaattcctccatccaaaaatacgGGTATGGAGAAACAgtagagagct < 1:27093804‑M1/24‑3 (MQ=255) aagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGc > 1:5003341‑M1/43‑68 (MQ=255) aaTACCCGGCGCCCGAGACCCGCCCGCGTCGCCCTGCAGGTATGGTGAAACAGGAGAGAGTTGCGATa > 1:25659222/1‑68 (MQ=255) ccGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATaaaaa > 1:13071579/1‑67 (MQ=255) tttcttcattaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGc > 1:6662783‑M1/33‑68 (MQ=255) tttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGc > 1:10517801‑M1/33‑68 (MQ=255) tttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGc > 1:41131710‑M1/33‑68 (MQ=255) tcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCg < 1:23553769‑M1/37‑1 (MQ=255) tcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGt > 1:24593524‑M1/31‑68 (MQ=255) ttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCa < 1:54649197‑M1/40‑1 (MQ=255) cattaattcctccatccaaaaaaccgGGTATGTAGAAACAGTAGAGAGTTGCGATAAAACGCGTCAgg > 1:12050538‑M1/27‑68 (MQ=255) catgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAgg > 1:2865060‑M1/27‑68 (MQ=255) tgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTa < 1:36478951‑M1/44‑1 (MQ=255) attcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAgg > 1:33837982‑M1/22‑67 (MQ=255) tcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATc > 1:40012506‑M1/20‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:46693498‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:886922‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc < 1:6241816‑M1/50‑1 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:49459500‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:35449006‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:55859847‑M1/19‑68 (MQ=255) ctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCg > 1:11489762‑M1/18‑68 (MQ=255) ctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCg > 1:38472931‑M1/18‑68 (MQ=255) ctccatccaaaaaaacgCGTATGGAGAAACAGTAGAGCGTTGCGATAAAAAGCGTCAGGTAGGATCCg > 1:56363497‑M1/18‑68 (MQ=255) tccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc < 1:34465990‑M1/50‑1 (MQ=255) tccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc < 1:22542943‑M1/50‑1 (MQ=255) gcgTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTaa < 1:8378931/68‑1 (MQ=255) tccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAAt > 1:30161258‑M1/13‑68 (MQ=255) tccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAAt > 1:48890708‑M1/13‑68 (MQ=255) tccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAAt > 1:16071451‑M1/13‑68 (MQ=255) ccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATc > 1:36932363‑M1/12‑68 (MQ=255) caaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCt > 1:18033509‑M1/11‑68 (MQ=255) ccTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTAt < 1:31239866/67‑1 (MQ=255) aaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAAt < 1:52202627‑M1/56‑1 (MQ=255) aaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATgg > 1:50543190‑M1/6‑68 (MQ=255) aaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATgg > 1:15572190‑M1/6‑68 (MQ=255) aaacgGGTATGGAGAAACAGTAGAGAGTCGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATgg > 1:37424451‑M1/6‑68 (MQ=255) | TGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGATAAA > CP009273/66493‑66627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |