New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =525 (0.750)36 (0.060) 9/100 NT 7.0% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 484 (0.770)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 734 total aligned reads displayed.

CCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108701‑108835
                                                                   |                                                                   
ccagacctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaag                                                                     <  1:13662812‑M1/1‑1 (MQ=255)
 cagacctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagc                                                                    >  1:31964954‑M1/67‑68 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:29446453‑M1/6‑1 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:3675694‑M1/6‑1 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:46408740‑M1/6‑1 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:57242535‑M1/6‑1 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 >  1:14663342‑M1/63‑67 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:56773872‑M1/63‑66 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:5356534‑M1/63‑66 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:35144661‑M1/63‑66 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:25644759‑M1/63‑66 (MQ=255)
     cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:5768360‑M1/63‑66 (MQ=255)
          tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:24681028/1‑68 (MQ=255)
          tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:15661270/67‑1 (MQ=255)
          tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:40605627/67‑1 (MQ=255)
           cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:27717061/68‑1 (MQ=255)
           cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:32419026/68‑1 (MQ=255)
           cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:37994987/68‑1 (MQ=255)
              tCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTa                                                       >  1:30808955/1‑68 (MQ=255)
               cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:9189211/66‑1 (MQ=255)
               cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:13140830/66‑1 (MQ=255)
               cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:6649273/66‑1 (MQ=255)
               cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:4175091/1‑68 (MQ=255)
               cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:12616637/1‑68 (MQ=255)
                  tGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:19166709/1‑68 (MQ=255)
                  tGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:10872990/1‑68 (MQ=255)
                    aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:37120511/1‑66 (MQ=255)
                    aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:47498884/1‑66 (MQ=255)
                        aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              >  1:6966422/1‑67 (MQ=255)
                          cAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcccc                                            >  1:42163220/1‑67 (MQ=255)
                          cAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcccc                                            >  1:6260929/1‑67 (MQ=255)
                            gagCAATCAAACGATCTTCACGCAGAAATTGCCCGAAACGCGGCGCGGAAATTAATACGCTCCccgcc                                         <  1:20061442/68‑1 (MQ=255)
                             agCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:19485417/1‑67 (MQ=255)
                              gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCGctgcc                                         >  1:54200308/1‑66 (MQ=255)
                              gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:55189159/1‑66 (MQ=255)
                              gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         <  1:30401102/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCGCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:8621614/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:26441302/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:15339983/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:52437086/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:51599805/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:43193659/66‑1 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                     >  1:42562807/1‑68 (MQ=255)
                                aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCt                                      <  1:34195096/67‑1 (MQ=255)
                                 aTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCttt                                    <  1:40347346/68‑1 (MQ=255)
                                 aTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCttt                                    <  1:44695509/68‑1 (MQ=255)
                                  tCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtttt                                   >  1:28648829/1‑68 (MQ=255)
                                   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:43526119/1‑68 (MQ=255)
                                   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:11942143/1‑68 (MQ=255)
                                      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTATTa                                  >  1:36058335/1‑65 (MQ=255)
                                        gATCTTCTCGCAGAAATTGCCCGATACGCGGCGCGGAAATAAATACGCACCCCCCCGCTTTTAAct                               >  1:21215536/1‑66 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:39673012/68‑1 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:4555975/1‑66 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:21542525/1‑66 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:44007012/1‑66 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:58059270/1‑66 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:22580053/1‑66 (MQ=255)
                                        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:16215821/1‑66 (MQ=255)
                                         aTCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:48960661/1‑65 (MQ=255)
                                            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         >  1:48356743/1‑68 (MQ=255)
                                            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         >  1:39958720/1‑68 (MQ=255)
                                             tCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:10084376/68‑1 (MQ=255)
                                             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:4863278‑M1/46‑1 (MQ=255)
                                               cattaattcagcagtttaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTATCTGCTGATTTa                      <  1:29016921‑M1/48‑1 (MQ=255)
                                                cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                     >  1:47162800/1‑68 (MQ=255)
                                                     ttcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCGTTTAACTGCTGAATTAATGCt                 <  1:35639366‑M1/53‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:25093503/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:52095652/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:55791260/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:11305173/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:51165307/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:8043576/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:34510439/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:45934157/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:38278625/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:33268449/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:2694206/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:20584181/66‑1 (MQ=255)
                                                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:3278504/66‑1 (MQ=255)
                                                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:18551552/68‑1 (MQ=255)
                                                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:22198206/68‑1 (MQ=255)
                                                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:2355274/68‑1 (MQ=255)
                                                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:17508123/68‑1 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:22959223/1‑68 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:14167202/1‑68 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:41049077/1‑68 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:17174502/1‑68 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:31508736/1‑68 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:45034599/1‑68 (MQ=255)
                                                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:7516571/1‑68 (MQ=255)
                                                           agttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          <  1:25980725‑M1/60‑1 (MQ=255)
                                                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:37546501/68‑1 (MQ=255)
                                                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:52983472/68‑1 (MQ=255)
                                                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:50501620/68‑1 (MQ=255)
                                                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:5000325/68‑1 (MQ=255)
                                                              gATACGCGGCGCGGAAAGTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:56372116/68‑1 (MQ=255)
                                                                tACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGct      <  1:9548177/67‑1 (MQ=255)
                                                                 aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       >  1:3936387/1‑65 (MQ=255)
                                                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  <  1:8371952‑M1/68‑1 (MQ=255)
                                                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  <  1:23967508‑M1/68‑1 (MQ=255)
                                                                   |                                                                   
CCTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108701‑108835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.