| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 772557 = | 193 (0.280) | 7 (0.010) | 5/98 | NT | 5.3% | coding (760/1266 nt) | tolA | membrane anchored protein in TolA‑TolQ‑TolR complex |
| ? | CP009273 | 772577 = | 83 (0.140) | coding (780/1266 nt) | tolA | membrane anchored protein in TolA‑TolQ‑TolR complex | |||||
Only 100 of 337 total aligned reads displayed.
TGCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGC > CP009273/772493‑772624 | gcagcttttgccgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcagctgc > 1:32046567‑M1/64‑68 (MQ=255) GCAGCTGTTAAGTAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:31083845‑M1/1‑68 (MQ=255) GCAGCTGATAAGCAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:30358991‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:4501913‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:17038379‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:15995159‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:5038564‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:57888867‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:54414546‑M1/1‑68 (MQ=255) GCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgct < 1:33769770‑M1/66‑1 (MQ=255) CAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc > 1:23085627‑M1/1‑67 (MQ=255) agctttctcggctgccgctttcttatcagctgcagccGACAAAAAAGCAGCAGAAAAAGCGgctgct < 1:25650484‑M2/30‑1 (MQ=255) AGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGctgctgcc > 1:32783654‑M1/1‑66 (MQ=255) gcttttgccgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGctgctg < 1:52486773‑M1/7‑1 (MQ=255) GCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa < 1:11893162‑M1/68‑1 (MQ=255) GCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa < 1:13618238‑M1/68‑1 (MQ=255) GCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa < 1:785337‑M1/68‑1 (MQ=255) GCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa < 1:55780434‑M1/68‑1 (MQ=255) GCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa < 1:14700935‑M1/68‑1 (MQ=255) TGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGaaa < 1:12905714‑M1/68‑1 (MQ=255) tAAGAAAGCGGCAGCAGAGAACGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAgg < 1:17649491/68‑1 (MQ=255) tAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAg > 1:43304114/1‑67 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:38031240/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:20508706/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:3711347/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:50030017/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:56294645/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:45749597/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:47559722/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAGAGCGGCTGCTGAAAAGgcagca > 1:53636391/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:44445009/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:42529136/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:36426335/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:34629302/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:5953084/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:6882279/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:14206981/1‑68 (MQ=255) aGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGcagcag < 1:16338087/68‑1 (MQ=255) gccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCagcagc > 1:11511545‑M1/49‑68 (MQ=255) gccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCagcagc > 1:6680704‑M1/49‑68 (MQ=255) gCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:11383443/1‑66 (MQ=255) gCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:27106904/1‑66 (MQ=255) gCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:437898/1‑66 (MQ=255) gCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:56625715/1‑66 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:3899015/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:35764433/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:22382692/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:42786945/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:33593195/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:29557246/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:29125855/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTg < 1:23762592/68‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTg < 1:45595518/68‑1 (MQ=255) gcagcaGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa > 1:28115566/1‑68 (MQ=255) cagcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCCGCAGCTGa < 1:13840752/67‑1 (MQ=255) cagcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa < 1:26463501/67‑1 (MQ=255) agcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGAt < 1:25283374/67‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:53162898/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:49562044/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:5404834/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:46490612/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:44150422/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAg < 1:24061926/67‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAg < 1:11721088/67‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGa > 1:51191080/1‑68 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGa > 1:18893417/1‑68 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGa > 1:35391076/1‑68 (MQ=255) agaAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGaaa > 1:28715835/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:47188650/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:53389411/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:12322536/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:48281830/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:7023956/1‑68 (MQ=255) agctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:4081494‑M2/11‑67 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:18304749‑M2/10‑68 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:22147101‑M2/10‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:45879749‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:21268725‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:55185924‑M2/9‑68 (MQ=255) gcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGc > 1:37581720‑M2/7‑68 (MQ=255) cagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCa > 1:2012835‑M2/6‑68 (MQ=255) aCAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGaaaaa > 1:17901084/1‑68 (MQ=255) aCAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGaaaaa > 1:14920505/1‑68 (MQ=255) tctgccgctgctttcttatcaGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAg < 1:54742124‑M1/46‑1 (MQ=255) agcagcAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgccgcc > 1:49996840/1‑67 (MQ=255) gcagcaGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc > 1:27508198/1‑68 (MQ=255) gcagcaGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc > 1:41334864/1‑68 (MQ=255) gcagAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAg > 1:40391640/1‑67 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:13193673/67‑1 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:48902778/67‑1 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:546211/67‑1 (MQ=255) aaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACa < 1:17151857/65‑1 (MQ=255) aaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACa < 1:33923483/65‑1 (MQ=255) aaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACa < 1:10040722/65‑1 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:10314347/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:4480231/1‑68 (MQ=255) aGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:9272891/1‑67 (MQ=255) aGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCAGCCGCAGACaaaaaa > 1:22679158/1‑67 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:306382/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:14730923/1‑68 (MQ=255) | TGCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGC > CP009273/772493‑772624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |