| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1405235 | NA (NA) | 9 (0.010) | 4/98 | NT | NA | intergenic (+94/+35) | dbpA/ttcA | ATP‑dependent RNA helicase, specific for 23S rRNA/tRNA 2‑thiocytidine biosynthesis protein |
| ? | CP009273 | = 1405259 | NA (NA) | intergenic (+118/+11) | dbpA/ttcA | ATP‑dependent RNA helicase, specific for 23S rRNA/tRNA 2‑thiocytidine biosynthesis protein | |||||
Only 100 of 1010 total aligned reads displayed.
AGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTC > CP009273/1405168‑1405302 | agTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTa > 1:24141740/1‑68 (MQ=255)agTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTa > 1:30845972/1‑68 (MQ=255)agTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTa > 1:35018567/1‑68 (MQ=255)agTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTa > 1:44029153/1‑68 (MQ=255) aaaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcc < 1:27006119‑M1/68‑4 (MQ=255) aaaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgc < 1:9449028‑M1/67‑3 (MQ=255) aaaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgc < 1:22463529‑M1/67‑3 (MQ=255) aaaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAg < 1:20457615‑M1/66‑2 (MQ=255) aCATCTTATTCTGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccg < 1:34485418‑M1/68‑6 (MQ=255) aCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccg < 1:14391567‑M1/68‑6 (MQ=255) aCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccg < 1:16094798‑M1/68‑6 (MQ=255) aCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccg < 1:2346158‑M1/68‑6 (MQ=255) cATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccga > 1:30079216‑M1/1‑62 (MQ=255) aTCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccgat > 1:27652575‑M1/1‑61 (MQ=255) aTCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccgat > 1:8309425‑M1/1‑61 (MQ=255) tCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccgat > 1:47812878‑M1/1‑60 (MQ=255) tCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAgcccgat > 1:18989862‑M1/1‑60 (MQ=255) ttATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATAc > 1:19682905/1‑67 (MQ=255) ttATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACg < 1:39443331/68‑1 (MQ=255) ttATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACg < 1:50181426/68‑1 (MQ=255) ttCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCtt > 1:7009225/1‑68 (MQ=255) cGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgc > 1:3778249/1‑68 (MQ=255) ggATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgcgc > 1:35656924/1‑68 (MQ=255) cttgCCGGAGGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCA > 1:8831004‑M2/2‑67 (MQ=255) aTTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCA < 1:55203082‑M2/67‑1 (MQ=255) aTTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCA < 1:21078580‑M2/67‑1 (MQ=255) aTTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCA > 1:51094692‑M2/1‑67 (MQ=255) gCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGG > 1:42609566‑M2/1‑68 (MQ=255) cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:40617116‑M2/1‑68 (MQ=255) cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:12377730‑M2/1‑68 (MQ=255) cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:52771685‑M2/1‑68 (MQ=255) cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGG > 1:30446406‑M2/1‑67 (MQ=255) tGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCtact > 1:22822585‑M2/1‑64 (MQ=255) tGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCtact > 1:33389733‑M2/1‑64 (MQ=255) tGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCt < 1:50692972/67‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:11536729/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:2493043/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:14774401/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:38391710/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:32123292/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:4708267/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGGAGCCCGATACGGTTGCGCATCGGGCGCttt < 1:45372184/68‑3 (MQ=38) gccggCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:11177120/65‑1 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:45717732/68‑1 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:44309942/68‑1 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg > 1:41905194/1‑68 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg > 1:28149522/1‑68 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:51661341/68‑1 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:28408183/68‑1 (MQ=255) aggCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGtt > 1:57472833/2‑68 (MQ=255) gCCGGGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAt > 1:56137514/1‑68 (MQ=255) ccGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAtt > 1:487003/1‑68 (MQ=255) cTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACt < 1:31643764/67‑1 (MQ=255) tCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCaa > 1:14037113/1‑67 (MQ=255) tCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCaa > 1:26512551/1‑67 (MQ=255) tCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCaa > 1:3268084/1‑67 (MQ=255) ccGGCCTCCATAAGAGTAgcccgatgcgcaagcgtatggggctactcttatggaggccggattagac > 1:56588025‑M1/1‑18 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:37415632/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:25640671/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:5489796/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:24496828/1‑68 (MQ=255) ggCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACcac < 1:34265301/68‑1 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:8117438/1‑68 (MQ=255) cTCCATAAGAGTAGCTCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCACCCACAt > 1:28832054/1‑67 (MQ=255) cTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt < 1:13690208/67‑1 (MQ=255) cTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt < 1:49921475/67‑1 (MQ=255) cTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt < 1:46426621/67‑1 (MQ=255) aTAAGAGTATCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:53730134/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:12956549/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:53189635/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:10460850/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:21916164/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:15180637/68‑1 (MQ=255) tAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGcc < 1:1859206/68‑1 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:42200824/1‑68 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:29320367/1‑68 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:6592286/1‑68 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCCCTTCAACCACATTCAGCCGTa > 1:17812232/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:17435346/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:43223584/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:25964869/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:4904756/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:7428375/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:41515004/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:6140785/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:57900324/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:29824871/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:56917988/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:3890348/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:16715514/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:3119455/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:33727366/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:54465169/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:15456021/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:400863/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:10045257/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:52072523/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:36322698/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGCCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:49596101/1‑67 (MQ=255) gTAgcccgatgcgcaagcgtatcgggctactcttatggaggccggataagacgcggccagcgtcgca > 1:36895308‑M1/1‑3 (MQ=255) | AGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTC > CP009273/1405168‑1405302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |