| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1405235 | NA (NA) | 9 (0.010) | 4/98 | NT | NA | intergenic (+94/+35) | dbpA/ttcA | ATP‑dependent RNA helicase, specific for 23S rRNA/tRNA 2‑thiocytidine biosynthesis protein |
| ? | CP009273 | = 1405259 | NA (NA) | intergenic (+118/+11) | dbpA/ttcA | ATP‑dependent RNA helicase, specific for 23S rRNA/tRNA 2‑thiocytidine biosynthesis protein | |||||
Only 100 of 1095 total aligned reads displayed.
CGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTC > CP009273/1405192‑1405326 | cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC < 1:48942952‑M2/68‑1 (MQ=255)cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:52024595‑M2/1‑68 (MQ=255)cGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC < 1:41661886‑M2/68‑1 (MQ=255)cGGATGCGACGCTGGCCGCGGCTTATCCGGCCGCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC > 1:13131188‑M2/1‑68 (MQ=255) gATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGC < 1:30045729‑M2/66‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATTAGAGTAGCCCGATACGCTTGCGCAGCGGGCGCtc > 1:43088503/1‑66 (MQ=38) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:7484677/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa > 1:31254034/1‑67 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:27429899/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:4252303/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:13762683/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:56402693/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:45703273/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:5474839/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:54247460/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt < 1:23168745/68‑1 (MQ=255) gCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGAAACGCTTGCGCATCGGGCGCTAt < 1:26101647/68‑1 (MQ=255) cGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTg > 1:6696204/1‑68 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg < 1:704211/68‑1 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg > 1:11400036/1‑68 (MQ=255) gCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg > 1:41258212/1‑68 (MQ=255) tGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGtt < 1:17717954/68‑1 (MQ=255) ccGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAtt > 1:487003/1‑68 (MQ=255) gTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCAc < 1:22157720/68‑1 (MQ=255) tCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACt > 1:47187640/1‑68 (MQ=255) tCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACt > 1:49199301/1‑68 (MQ=255) aTCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCa > 1:3830911/1‑67 (MQ=255) tCCGGCCTGCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAc < 1:31658545/68‑1 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:30464660/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:38998934/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:44292137/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:25640671/1‑68 (MQ=255) ccGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc > 1:55614305/1‑68 (MQ=255) ggCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACcac < 1:11768439/68‑1 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:27917865/1‑68 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:22649072/1‑68 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:20617282/1‑68 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt > 1:42087504/1‑68 (MQ=255) cTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt < 1:1449979/67‑1 (MQ=255) cTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt < 1:57706948/67‑1 (MQ=255) cATAAGATTAGCCCGATACGCTTGCGCATCGGGGGCTATCCTGGTTATTTCACTTCAACCACATTCAg < 1:37477837/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAg > 1:34444029/1‑67 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:40125470/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:28302532/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:37043931/68‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc < 1:6261153/68‑1 (MQ=255) tAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGcc < 1:33632308/68‑1 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:14175244/1‑68 (MQ=255) agagTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt > 1:4977760/1‑68 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:57218195/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:5502090/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:5363704/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:46810620/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:52390946/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:10562840/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:10045257/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:33987747/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:24542848/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:15395113/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:21216495/1‑67 (MQ=255) agTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:29226352/1‑67 (MQ=255) gTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:3658351/1‑66 (MQ=255) gTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTa > 1:28839020/1‑66 (MQ=255) aGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTc > 1:23987535/1‑68 (MQ=255) gCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa > 1:51400731/1‑68 (MQ=255) cccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa > 1:50630939/1‑67 (MQ=255) cccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa > 1:44997276/1‑67 (MQ=255) cctaTACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt < 1:50955460/64‑1 (MQ=255) ccGATACGCTTTCTCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt < 1:17280082/67‑1 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCCCTTCAACCACATTCAGCCGTAACTCAt > 1:1239112/1‑67 (MQ=255) ccGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt > 1:35445475/1‑67 (MQ=255) gATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCa < 1:18853102/68‑1 (MQ=255) cGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt < 1:19974889/61‑1 (MQ=255) cGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTg > 1:3278129/1‑68 (MQ=255) cGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAG‑CGTAACTCATCCAACTGa > 1:8592435/1‑68 (MQ=255) gCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGa < 1:43625877/68‑1 (MQ=255) cTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGAt > 1:15966447/1‑68 (MQ=255) gcATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:19244363/1‑68 (MQ=255) gcATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:40857248/1‑68 (MQ=255) gcATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:39588602/1‑68 (MQ=255) gcATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:34997734/1‑68 (MQ=255) gcATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCa > 1:46173042/1‑68 (MQ=255) aTCGGGCttctcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataaga > 1:16464726‑M2/1‑7 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgattaagat < 1:8026037‑M2/68‑62 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagat < 1:58023354‑M2/68‑62 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataaga > 1:5306509‑M2/1‑7 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataaga > 1:47812878‑M2/1‑7 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataaga > 1:29682662‑M2/1‑7 (MQ=255) aTCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataaga > 1:18180025‑M2/1‑7 (MQ=255) aTCGGGCGCTATCCTGGTTATTTCACTTCCACCACATTCAGCCGTAACTCATCCAACTGATTTTCAt < 1:56960722/67‑1 (MQ=255) aTCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAt < 1:49921725/67‑1 (MQ=255) aTCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAt < 1:26662872/67‑1 (MQ=255) tCGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatg > 1:30897847‑M2/1‑6 (MQ=255) cGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt < 1:14992576‑M2/68‑64 (MQ=255) cGGGCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt > 1:8242552‑M2/1‑5 (MQ=255) cGGGCtactctaatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgt > 1:50147873‑M2/1‑5 (MQ=255) cGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtct > 1:32134025/1‑67 (MQ=255) gggCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtcttc < 1:2500408/68‑1 (MQ=255) gCtactcttatggaggccggataagacgcggccagcgtcgcatccggcaatcccgaataagatgttt < 1:9449028‑M2/67‑66 (MQ=255) cgcTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtcttct > 1:36016433/1‑66 (MQ=255) | CGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTC > CP009273/1405192‑1405326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |