| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 457 (0.650) | 23 (0.040) | 10/94 | NT | 6.0% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 335 (0.570) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 749 total aligned reads displayed.
CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA > CP009273/1821322‑1821455 | cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:3713248/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:18333333/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:7704592/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:33845544/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:19946977/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:44724640/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT > 1:30786559‑M1/1‑67 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:31363110/1‑68 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:13861770/1‑68 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct < 1:52783656/68‑1 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:25370478/1‑68 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:3157255/1‑67 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:51069450/1‑67 (MQ=255) aGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:21307850/1‑68 (MQ=255) aGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:19494368/1‑68 (MQ=255) aGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTgcctgc > 1:24179932‑M1/1‑62 (MQ=255) gTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:41631044/1‑67 (MQ=255) cATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttcttc < 1:38215842/67‑1 (MQ=255) cATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:15956995/1‑65 (MQ=255) cATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:5867038/1‑65 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:934488/1‑64 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:21710918/68‑1 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:32953631/68‑1 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:23820894/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:45832415/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:37762910/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:46474851/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:31022950/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:1232276/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:11131919/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:43121296/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:1331505/68‑1 (MQ=255) gAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCa < 1:37287371/68‑1 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:54902841/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:57451741/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:27242105/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:30414766/1‑68 (MQ=255) aaaCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCAccc < 1:10046396/68‑1 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:15617115/1‑68 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:46827144/1‑68 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:8539347/1‑68 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:24581462/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:50321241/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:25645274/1‑68 (MQ=255) gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAcc > 1:42644840/1‑67 (MQ=255) gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc < 1:6298499/66‑1 (MQ=255) gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCg < 1:16226867/68‑1 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAgg > 1:35102979/1‑67 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:7025032/1‑68 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:51990031/1‑68 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:54434356/1‑68 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:36879591‑M2/68‑3 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCa > 1:28533356‑M2/1‑66 (MQ=255) atcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgc > 1:24824480‑M2/1‑64 (MQ=255) tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc < 1:25968517‑M2/68‑6 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:9032025‑M2/68‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:1656723‑M2/67‑8 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:44024212/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc < 1:15308897/68‑1 (MQ=255) ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGGacgccgggcgg > 1:13595951‑M2/1‑57 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:28908068/68‑1 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:28408349/68‑1 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:26488697/68‑1 (MQ=255) cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc < 1:43589049/68‑1 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:28233605/68‑1 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:20374906/68‑1 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:56263533/68‑1 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:20820746/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc > 1:47959942/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc > 1:10487917/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:12641144/68‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATCCCTCCCGCAACCGCAGGCACGCCGGGCCGCCGCCAGTc > 1:11894900/1‑67 (MQ=255) aCCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGc < 1:1767803/68‑1 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc < 1:39492789/68‑1 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc < 1:36600353/68‑1 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc < 1:49931320/68‑1 (MQ=255) cGCCCGGCGTTCTTCTTCTGTCAATCCCACCCGCAACCCCAGGCccgccgggcggtgaatccggcggt > 1:40948266‑M2/1‑44 (MQ=255) gCCCGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtg > 1:22910137‑M1/1‑9 (MQ=255) cccGGCGTTCTTGTTCTGTCGATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt > 1:47470753/1‑67 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat < 1:49239959‑M1/68‑62 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat < 1:29731324‑M1/68‑62 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:5585844‑M1/67‑61 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:14629832‑M1/67‑61 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:6718360‑M1/67‑61 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:40237981‑M1/67‑61 (MQ=255) ccGGCGTgcctgcgggtgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat < 1:40506991‑M1/68‑62 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt > 1:14212401/1‑66 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:45442017/68‑1 (MQ=255) ggCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatga < 1:9724844‑M1/68‑64 (MQ=255) gCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGACGCCGCCATTCGCCATGCtt > 1:53561403/1‑67 (MQ=255) cGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatg > 1:2352814‑M1/1‑3 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga < 1:53311932‑M1/68‑67 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga < 1:44294786‑M1/68‑67 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga > 1:38808702‑M1/1‑2 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga < 1:34624665‑M1/68‑67 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga < 1:32314851‑M1/68‑67 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga < 1:22340025‑M1/68‑67 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga > 1:11693639‑M1/1‑2 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:36128759/1‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa < 1:39901602/68‑1 (MQ=255) | CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA > CP009273/1821322‑1821455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |