New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 1821389457 (0.650)23 (0.040) 10/94 NT 6.0% coding (1128/1344 nt) astB succinylarginine dihydrolase
?CP009273 = 1821423 335 (0.570)coding (1094/1344 nt) astB succinylarginine dihydrolase

Only 100 of 519 total aligned reads displayed.

GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT  >  CP009273/1821356‑1821490
                                                                   |                                                                   
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:51990031/1‑68 (MQ=255)
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:37807162/1‑68 (MQ=255)
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:54434356/1‑68 (MQ=255)
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:137848/1‑68 (MQ=255)
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:57813556/1‑68 (MQ=255)
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:11908750/1‑68 (MQ=255)
gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                                                     >  1:9160187/1‑68 (MQ=255)
  tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac                                                                   <  1:11798547‑M2/68‑3 (MQ=255)
   catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg                                                                  >  1:37140640‑M2/1‑65 (MQ=255)
   catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac                                                                   <  1:24069956‑M2/67‑3 (MQ=255)
    atcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgc                                                                 >  1:24824480‑M2/1‑64 (MQ=255)
     tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                                                                <  1:43922314‑M2/68‑6 (MQ=255)
     tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                                                                <  1:45387876‑M2/68‑6 (MQ=255)
     tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                                                                <  1:26236896‑M2/68‑6 (MQ=255)
     tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                                                                <  1:15533410‑M2/68‑6 (MQ=255)
     tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                                                                <  1:6118517‑M2/68‑6 (MQ=255)
       atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCACCCGCAGGCacgccgg                                                              <  1:40506991‑M2/68‑8 (MQ=255)
       atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                                                              <  1:49239959‑M2/68‑8 (MQ=255)
       atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                                                              <  1:29731324‑M2/68‑8 (MQ=255)
        tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                                                              <  1:1656723‑M2/67‑8 (MQ=255)
        tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                                                              <  1:14629832‑M2/67‑8 (MQ=255)
        tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                                                              <  1:40237981‑M2/67‑8 (MQ=255)
         caCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggc                                                            >  1:12636904‑M2/1‑59 (MQ=255)
          aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                                                           >  1:30640365/1‑68 (MQ=255)
           ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                                                           >  1:44118884/1‑67 (MQ=255)
            cgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccg                                                          >  1:10636226/1‑67 (MQ=255)
             gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc                                                        <  1:28908068/68‑1 (MQ=255)
               cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc                                                      <  1:43589049/68‑1 (MQ=255)
               cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccg                                                       >  1:28275043/1‑67 (MQ=255)
               cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccg                                                       >  1:1407467/1‑67 (MQ=255)
                ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc                                                     <  1:20374906/68‑1 (MQ=255)
                ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc                                                     <  1:28491482/68‑1 (MQ=255)
                  aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCa                                                    <  1:13429426/67‑1 (MQ=255)
                  aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt                                                   >  1:21509637/1‑68 (MQ=255)
                  aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt                                                   >  1:20820746/1‑68 (MQ=255)
                    tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc                                                 <  1:44495683/68‑1 (MQ=255)
                    tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc                                                 >  1:47959942/1‑68 (MQ=255)
                    tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc                                                 >  1:35375615/1‑68 (MQ=255)
                      aCCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGc                                               <  1:1767803/68‑1 (MQ=255)
                       ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc                                              <  1:55840169/68‑1 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggtga                                           >  1:43134933‑M2/1‑41 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggtga                                           >  1:36828675‑M2/1‑41 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc                                          <  1:7842211/68‑1 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc                                          <  1:3210353/68‑1 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc                                          <  1:10064740/68‑1 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc                                          <  1:23666201/68‑1 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc                                          <  1:36241482/68‑1 (MQ=255)
                           ccGGCGTTCTTCTTCTGTCAATACCACCCGAAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt                                            >  1:22294283/1‑66 (MQ=255)
                            cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt                                         <  1:53494086/68‑1 (MQ=255)
                               cGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc                                      >  1:8862931/1‑68 (MQ=255)
                                gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCccgccgggcggtgaatccggcggtgatgatga                                     >  1:25626008‑M2/1‑36 (MQ=255)
                                gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc                                      >  1:15011757/1‑67 (MQ=255)
                                gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa                                     <  1:50165008/68‑1 (MQ=255)
                                gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa                                     <  1:18892325/68‑1 (MQ=255)
                                  tcttcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCAc                                    <  1:31393049/67‑1 (MQ=255)
                                     tcttctGTCAATACCACCCGCGACAGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa                                >  1:56174471/1‑68 (MQ=255)
                                     tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa                                >  1:18297573/1‑68 (MQ=255)
                                       ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt                              <  1:26546937/68‑1 (MQ=255)
                                       ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt                              <  1:20668584/68‑1 (MQ=255)
                                        tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc                             >  1:38584294/1‑68 (MQ=255)
                                        tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc                             >  1:12848615/1‑68 (MQ=255)
                                        tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc                             >  1:39985580/1‑68 (MQ=255)
                                        tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc                             >  1:23109344/1‑68 (MQ=255)
                                          tGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCaa                           >  1:6653685/1‑68 (MQ=255)
                                          tGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCaa                           >  1:7076840/1‑68 (MQ=255)
                                             cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAg                         >  1:36606582/1‑67 (MQ=255)
                                             cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAg                         >  1:53013663/1‑67 (MQ=255)
                                             cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa                        <  1:161190/68‑1 (MQ=255)
                                             cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa                        <  1:19490059/68‑1 (MQ=255)
                                             cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa                        <  1:33528377/68‑1 (MQ=255)
                                               aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt                      <  1:46976781/68‑1 (MQ=255)
                                               aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt                      <  1:50921428/68‑1 (MQ=255)
                                                tACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtt                     >  1:42452746/1‑68 (MQ=255)
                                                 accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCCTGCTTTCACGTAAATCAAAGACttt                    >  1:52353937/1‑68 (MQ=255)
                                                 accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt                    >  1:24352617/1‑68 (MQ=255)
                                                 accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt                    >  1:3570257/1‑68 (MQ=255)
                                                 accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt                    >  1:34583267/1‑68 (MQ=255)
                                                 accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt                    >  1:49970273/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:53760597/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:56951797/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:11073068/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:9540040/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:4661769/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:27322772/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:31687114/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:32455104/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:34788625/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:39264662/1‑68 (MQ=255)
                                                  ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt                   >  1:44871565/1‑68 (MQ=255)
                                                      ccGCAACCGCAGGCacgccgggcggtgaatccggcggtgatgatgaacgatacgctgtttaatgcgct               >  1:30362540‑M2/1‑14 (MQ=255)
                                                      ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGt                >  1:27819642/1‑67 (MQ=255)
                                                         cAACCGCAGGCACGCCGGGCCGCCGCGATTCGGCATGCTTTCACGTAAATCAAAGACTTTTAGtac              >  1:8163482/1‑64 (MQ=255)
                                                          aaCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCt           <  1:21182174/68‑1 (MQ=255)
                                                            ccGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCGTTCACGTAAATCAAAGACTTTTAGTTCGCTaa         >  1:39646546/1‑68 (MQ=255)
                                                             cGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTaa         >  1:4763670/1‑67 (MQ=255)
                                                             cGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAAt        <  1:41129384/68‑1 (MQ=255)
                                                             cGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAAt        <  1:45789965/68‑1 (MQ=255)
                                                                aGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCgg     >  1:18717556/1‑68 (MQ=255)
                                                                aGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCg      <  1:41796880/67‑1 (MQ=255)
                                                                  gCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGt   >  1:11335846/1‑68 (MQ=255)
                                                                   |                                                                   
GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT  >  CP009273/1821356‑1821490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.