| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 454 (0.650) | 37 (0.060) | 9/94 | NT | 8.7% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 400 (0.680) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 834 total aligned reads displayed.
AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTG > CP009273/2435934‑2436065 | ggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCcgc > 1:47037485/1‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaattaagcgttacctgccagCcgcg > 1:52641448‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:9667147‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:55891508‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:5150087‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:46241373‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:416300‑M1/64‑68 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCcgc > 1:11005232/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCcgc > 1:43744833/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCcgc > 1:37554626/1‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatcctcgcaataaagcgttacctgccagCCGCGcc > 1:49327529‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:53710428‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:50916976‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:19762975‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCg < 1:3804903‑M1/8‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:39116867‑M1/9‑1 (MQ=255) ggtcgcAAACGGGAATTGCTTTGCGGGGTGATGGAACATACATTAGCGCTCCCGTGCTCCGCGCCGTg < 1:876648/65‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:16547327/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:3361534/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:21691661/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg > 1:24947662/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:10012307/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:40234650/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:25664187/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:17177559/1‑68 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:4431657/67‑1 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:47298848/67‑1 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:4858954/67‑1 (MQ=255) actGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTTACCGCACgg < 1:57657041/66‑1 (MQ=255) aTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACggg < 1:14428142/68‑1 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:6552295/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:12519054/1‑68 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca < 1:15583742/68‑1 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca < 1:7092554/68‑1 (MQ=255) ggggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaa > 1:50287033/1‑68 (MQ=255) ggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAAc > 1:3253127/1‑68 (MQ=255) gTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACg > 1:31148484/1‑68 (MQ=255) atccgcgcaataaagcgttacctgccagCCGCGCCGTGGGTTAACCGCACGGGCGGCCCCAAAcgggg < 1:19338434‑M1/40‑2 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCATACGGGAAgcg > 1:36173596/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:8529055/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACAGGCAGCAGCAAACGGGAAgcg > 1:40605053/1‑68 (MQ=255) cAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggc > 1:5404446/1‑68 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:42361650/1‑68 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:17613972/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:36916261/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAt < 1:47655414/67‑1 (MQ=255) aTTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTa < 1:14793130/68‑1 (MQ=255) ttACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTa > 1:41133786/1‑67 (MQ=255) gcgttacctgccagCCGGGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg < 1:54579134‑M1/54‑1 (MQ=255) gcgttacctgccagCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAAGCGGCGATTATcg < 1:57396260‑M1/54‑1 (MQ=255) gcgttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGCTTATcg < 1:13658775‑M1/54‑1 (MQ=255) gcgttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg < 1:18111567‑M1/54‑1 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:31587233/1‑68 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAAGCGGGGATTATcg > 1:27549641/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcgg < 1:34280066/68‑1 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcgg < 1:45691261/68‑1 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:56848397/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:58076946/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:2609467/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:30791655/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:49000781/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:8066416/1‑67 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc > 1:44806131/1‑68 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc > 1:56328534/1‑68 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:225112/68‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:18982195/68‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:32101884/68‑1 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:2822758/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:24291463/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:52503898/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:43300849/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGGGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg < 1:21329319/68‑1 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:6303712/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:55050092/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:23319468/1‑68 (MQ=255) cctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtg < 1:35375024‑M1/60‑1 (MQ=255) ctgccagCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAAGGGGCGATTTTCGGCggtgg < 1:3282635‑M1/61‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:35067047/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:27308783/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:22206486/68‑1 (MQ=255) ccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtggt > 1:18769295/1‑68 (MQ=255) ccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAt < 1:53322039‑M1/64‑1 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:25302974/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:9419233/1‑68 (MQ=255) agCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt < 1:7622167‑M1/65‑1 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCACCCGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:20929483/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGACGCGGCGATTATCGGCGGTGGTATTg > 1:42984891/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:11508219/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:12083840/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:12799700/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:38785349/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:38343351/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:2035089/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:30176829/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:29507574/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:28836623/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:26832760/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:26396104/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:23843790/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:16071881/1‑67 (MQ=255) | AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTG > CP009273/2435934‑2436065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |