New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3538010572 (0.820)26 (0.040) 12/94 NT 5.1% coding (194/771 nt) bioH pimeloyl‑ACP methyl ester carboxylesterase
?CP009273 = 3538051 496 (0.840)coding (153/771 nt) bioH pimeloyl‑ACP methyl ester carboxylesterase

Only 100 of 701 total aligned reads displayed.

CAGGTGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGCAACGCC  >  CP009273/3537984‑3538118
                                                                   |                                                                   
cAGGTGCCTGTTGCAGCACGTCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGc                                                                     <  1:40434609/68‑1 (MQ=255)
cAGGTGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGc                                                                     <  1:52050856/68‑1 (MQ=255)
cAGGTGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGc                                                                     <  1:51717618/68‑1 (MQ=255)
  ggTGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCcc                                                                   <  1:17457288‑M2/68‑3 (MQ=255)
    tGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccga                                                                 <  1:8935662‑M2/68‑5 (MQ=255)
    tGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccga                                                                 <  1:30908443‑M2/68‑5 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                >  1:7260186‑M2/1‑63 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                >  1:40676660‑M2/1‑63 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                >  1:15025742‑M2/1‑63 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                >  1:56254246‑M2/1‑63 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                <  1:49838851‑M2/68‑6 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                >  1:17029334‑M2/1‑63 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                <  1:51360063‑M2/68‑6 (MQ=255)
     gCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                >  1:5912734‑M2/1‑63 (MQ=255)
      ccTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaa                                                                <  1:23344405‑M2/67‑6 (MQ=255)
         gTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccg                                                            <  1:54276715‑M2/68‑10 (MQ=255)
         gTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccg                                                            <  1:26377911‑M2/68‑10 (MQ=255)
         gTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccg                                                            <  1:3065443‑M2/68‑10 (MQ=255)
         gTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccg                                                            <  1:11182985‑M2/68‑10 (MQ=255)
           tGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgt                                                           >  1:6094574‑M2/1‑57 (MQ=255)
           tGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgt                                                           >  1:43422356‑M2/1‑57 (MQ=255)
           tGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgt                                                           >  1:48189625‑M2/1‑57 (MQ=255)
            gcagcaCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGc                                                         >  1:50427049/1‑68 (MQ=255)
            gcagcaCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGc                                                         >  1:56904357/1‑68 (MQ=255)
            gcagcaCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGc                                                         >  1:49438339/1‑68 (MQ=255)
            gcagcaCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGc                                                         >  1:15430890/1‑68 (MQ=255)
              agcaCGGCTTCGGCCATATCAGCAAGTGCCAGCGCACCAAATCCCCGGCTACGCccgaagccgtgct                                                        >  1:30099096‑M2/1‑54 (MQ=255)
              agcaCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgtgct                                                        >  1:44951436‑M2/1‑54 (MQ=255)
              agcaCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgtgct                                                        >  1:45556316‑M2/1‑54 (MQ=255)
                caCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgg                                                      >  1:18834780/1‑67 (MQ=255)
                 aCGGCTTCGGCCATATCAGCCAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgggc                                                    <  1:32235698/68‑3 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgtgctgc                                                      >  1:15850650‑M2/1‑51 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgg                                                      <  1:37299724/66‑1 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgg                                                      <  1:27121714/66‑1 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgg                                                      <  1:12589482/66‑1 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgg                                                      <  1:16405526/66‑1 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAgg                                                      <  1:33228070/66‑1 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    <  1:3886596/68‑1 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:39400505/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:3628582/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:8574895/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:41737291/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:29234048/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:42451021/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:12043703/1‑68 (MQ=255)
                 aCGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTc                                                    >  1:25767520/1‑68 (MQ=255)
                    gCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTcaac                                                 >  1:57815998/1‑68 (MQ=255)
                     cTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTcaac                                                 <  1:21891613/67‑1 (MQ=255)
                     cTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTcaac                                                 <  1:45952809/67‑1 (MQ=255)
                     cTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTcaac                                                 <  1:14173455/67‑1 (MQ=255)
                     cTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTcaac                                                 <  1:47457189/67‑1 (MQ=255)
                      ttCGGCCATATCAGCAAGTGCCAGCGCACCAAATCCCCGGCTACGCCCGCAGCCGGGCAGGTcaacaa                                               >  1:6943483/1‑68 (MQ=255)
                      ttCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTcaacaa                                               >  1:28045363/1‑68 (MQ=255)
                       tCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAg                                              <  1:38407732/68‑1 (MQ=255)
                        cGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAgg                                             <  1:34890133/68‑1 (MQ=255)
                           ccATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGc                                          >  1:7579024/1‑68 (MQ=255)
                           ccATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGc                                          >  1:41322857/1‑68 (MQ=255)
                           ccATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGc                                          >  1:27725885/1‑68 (MQ=255)
                            cATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCccgaagccgtgctgcaacaggcacctga                                         >  1:24282867‑M2/1‑40 (MQ=255)
                             atatCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAg                                        <  1:44046542/68‑1 (MQ=255)
                              tatCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGc                                       <  1:18496408/68‑1 (MQ=255)
                               atCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCg                                      <  1:38039290/68‑1 (MQ=255)
                               atCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCg                                      <  1:19807911/68‑1 (MQ=255)
                               atCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCg                                      <  1:24032136/68‑1 (MQ=255)
                                tCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGt                                     >  1:54632795/1‑68 (MQ=255)
                                tCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGt                                     >  1:10945539/1‑68 (MQ=255)
                                 cAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTa                                    >  1:28831801/1‑68 (MQ=255)
                                   gCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTaaa                                  >  1:20303755/1‑68 (MQ=255)
                                     aaGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAAt                                >  1:19394796/1‑68 (MQ=255)
                                     aaGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAAt                                >  1:33732677/1‑68 (MQ=255)
                                         gACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGGGa                            >  1:13551799/1‑68 (MQ=255)
                                         gACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            <  1:3540901/68‑1 (MQ=255)
                                         gACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            <  1:13721416/68‑1 (MQ=255)
                                          aCAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            >  1:5061233/1‑67 (MQ=255)
                                          aCAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            >  1:55851398/1‑67 (MQ=255)
                                          aCAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            >  1:39635108/1‑67 (MQ=255)
                                          aCAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            >  1:32710967/1‑67 (MQ=255)
                                          aCAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGa                            >  1:47831432/1‑67 (MQ=255)
                                            aGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCt                         >  1:10107551/1‑68 (MQ=255)
                                             gcgcACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTa                        >  1:25440122/1‑68 (MQ=255)
                                              cgcACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTaa                       >  1:20843819/1‑68 (MQ=255)
                                               gcACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTaa                       <  1:53237451/67‑1 (MQ=255)
                                               gcACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAg                      >  1:31717028/1‑68 (MQ=255)
                                               gcACCAAATCCCCGGCAACGCccgacgccgtgctgcaacaggcacctgataaagccatttggttagg                       >  1:52673001‑M2/1‑21 (MQ=255)
                                                 aCCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGt                     >  1:36802600/1‑67 (MQ=255)
                                                     aaTCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTc                >  1:2483364/1‑68 (MQ=255)
                                                      aTCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               <  1:54013566/68‑1 (MQ=255)
                                                      aTCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               <  1:13103661/68‑1 (MQ=255)
                                                      aTCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               <  1:55291786/68‑1 (MQ=255)
                                                      aTCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               <  1:34529076/68‑1 (MQ=255)
                                                      aTCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               <  1:46810050/68‑1 (MQ=255)
                                                       tCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               >  1:23799781/1‑67 (MQ=255)
                                                       tCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCg               >  1:34128744/1‑67 (MQ=255)
                                                         cccGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCa            >  1:48801840/1‑68 (MQ=255)
                                                         cccGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCa            >  1:46428986/1‑68 (MQ=255)
                                                             gCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGc        >  1:56671023/1‑68 (MQ=255)
                                                             gCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGc        >  1:21256108/1‑68 (MQ=255)
                                                                  gCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGCAACg    >  1:46209871/1‑67 (MQ=255)
                                                                   cccGAAGCCGGGCAGGTCACCAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGCAACGc   >  1:6387251/1‑67 (MQ=255)
                                                                   cccGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGCAACGcc  >  1:22422952/1‑68 (MQ=255)
                                                                   |                                                                   
CAGGTGCCTGTTGCAGCACGGCTTCGGCCATATCAGCAAGTGACAGCGCACCAAATCCCCGGCTACGCCCGAAGCCGGGCAGGTCAACAAGGTGCAGCGTAAAATGCGAGCTAAGTTCCTCGTCAATGCAACGCC  >  CP009273/3537984‑3538118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.