| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3202855 = | NA (NA) | 9 (0.020) | 5/94 | NT | NA | intergenic (+9/+34) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein |
| ? | CP009273 | 3202881 = | NA (NA) | intergenic (+35/+8) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein | |||||
Only 100 of 112 total aligned reads displayed.
GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3202930‑3202855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > CP009273/3202881‑3202946 GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:2413406/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:4680248/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:19938968/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:20451384/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:46357830/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:21489212/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:22288531/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:45746602/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:45620772/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:45246856/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:24027522/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:45183606/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:10458967/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:24179232/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:24965404/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:44542873/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:27563592/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:27940187/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:3947111/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:38169987/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:29364299/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:34957385/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:34668380/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:34638759/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:47320838/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:10815127/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:10912794/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:8476004/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:1149951/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:10555586/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:6295042/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:12881484/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:50953043/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:14511781/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:50387833/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:49036718/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:16726410/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:47862644/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:18580773/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTAATGGGTGCCGGAGAGCAATTT < 1:16261690/68‑1GTGCGTCCGCGCGGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:21960249/68‑1 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:13053382/1‑67 GCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCC > 1:46009423/1‑68 GCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCC > 1:8554735/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:24075347/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:46938430/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:32612820/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:35455064/1‑68 GTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:8276943/1‑67 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:508805/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:26826931/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGG > 1:11332098/1‑67 CCGCGCTGGCCGCGGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC < 1:44886491/67‑1 CCGCGCTGGCCGCGGGCGGAGTTACCGGCTGCGTAAAACTAATGGGTGCCGGAGAGCAATTTCCGGC < 1:41672769/67‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:35292119/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:8939444/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCA > 1:28478738/1‑67 GCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC > 1:14431379/1‑68 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:12773620/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:29102240/67‑1 CGCGGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:14051891/67‑1 GTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGTTTTACGCAGC < 1:23777002/67‑1 TACCGGCTGCGTAAAACTATTGGGGGCCGGTGAGCAATTTCCGGCACCCAATAGTTTTACGCAGCCG < 1:50242683/67‑1 TACCGGCTGCGTAAAACTATTGGGGGCCGGAGAGCAATTTCCGGCACCCAATAGTTTTACGCAGCCG < 1:22423117/67‑1 TACCGGCTGCGAAAAACTATTGGGTGCCGGAGAGCAATTCCCGGCACCCAATAGTTTTACGCAGCC < 1:2406415/66‑1 TACCGGCGGCGTAAAACTATTGGGTGCCGGAGCGCAATTTCCGGCACCCAATTGTTTTACGCAGCCG < 1:16091507/67‑1 TTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACG < 1:2597344/61‑1 TTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACG < 1:2540694/61‑1 CCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCG > 1:7780644/1‑68 CCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCG > 1:46060567/1‑68 CCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCG > 1:20703646/1‑68 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:1268708/68‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:11411849/68‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:32013202/68‑1 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:19204482/1‑68 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:5026572/1‑68 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG < 1:36613538/68‑1 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:7963114/1‑68 cCCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:22719034/2‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCTAGAT > 1:14515925/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATC > 1:48338119/1‑68 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:7503501/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:11078205/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:33613033/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:10367936/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:18825526/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:21183109/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:45030423/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:24380663/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:43084948/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:41800487/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:36066239/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:30930654/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:32504186/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:32807112/1‑67 ACCCAATAGTTTAACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:18400474/1‑67 CCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC < 1:18696757/68‑1 CCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACG < 1:35903181/53‑1 CCAATGGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > 1:49657281/1‑67 CCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > 1:38798685/1‑67 GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3202930‑3202855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > CP009273/3202881‑3202946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |