| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3701786 | 95 (0.150) | 8 (0.020) | 7/88 | NT | 9.7% | intergenic (‑721/+190) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | = 3701789 | NA (NA) | intergenic (‑724/+187) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 366 total aligned reads displayed.
TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3701708‑3701786‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagcctgctcAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGAC < CP009273/3701789‑3701723 TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:24705489/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:25460449/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:11763562/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:12598457/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:48812913/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:30171090/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:4802475/1‑68TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAA > 1:35844715/1‑68 CAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAA > 1:23392868/1‑68 CAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAA > 1:40187640/1‑68 AGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAA > 1:9595374/1‑68 AGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAA > 1:224009/1‑68 AGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAA > 1:2946613/1‑68 AGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAA > 1:15373180/1‑68 AGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAA > 1:46412179/1‑68 GGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTTCAGAAGCAAAAAA > 1:39938870/1‑68 CCTACGTCGAGTCGAACCTCCCTGCCCGCGGAGGTTCGCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:1335990/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:48576351/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:11149304/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:25053085/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:8254085/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:51181745/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:26442584/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:27545193/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:50076934/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:30640696/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:32597091/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:33177511/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:47853220/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:44138400/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:4595493/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:12281538/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:20425992/1‑67 CCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:15006797/1‑67 CTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAG > 1:5770311/1‑66 ACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTG < 1:3542300/68‑1 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCCTCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:25675818/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCCTCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:34626146/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:45189940/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:4625843/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:16307059/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:47039588/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:14810845/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:49095316/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:13636255/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:44929711/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:43373361/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:24061946/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:9414537/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:6428961/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:8730237/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:11599007/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:20974218/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:27886498/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGC > 1:7336579/1‑67 GTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCT > 1:21937771/1‑65 TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:19304629/68‑1 TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC > 1:16713560/1‑68 TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:39083131/68‑1 TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC > 1:50907901/1‑68 TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCT < 1:36670057/67‑1 TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCT < 1:22616110/67‑1 TCGAGGCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:29634292/68‑1 CGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:14516887/67‑1 CGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:3811168/67‑1 CGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:7018263/67‑1 CGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:19755120/67‑1 CGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:32805489/67‑1 TCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGA > 1:3847719/1‑68 TCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGA > 1:34128825/1‑68 AGATGCAAAAAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCC > 1:41022224/1‑68 AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG < 1:8988488/68‑1 AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG < 1:17494430/68‑1 AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG < 1:43029162/68‑1 AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG < 1:42709104/68‑1 AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG > 1:41769682/1‑68 AAAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAG < 1:33612310/67‑1 AAAGCCTGCGCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGG < 1:35560431/68‑1 AAGCCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGG > 1:377164/1‑68 AGCCTGCTCAACGAGCAGGGTTTTTTGCATCTGCAGCTCATGTGGATGAGAACCTCCGGGGGCAGGGA > 1:10006967/1‑68 GCCTGCTCCACGAGCAGGCGTATTTGGATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAG > 1:43525804/1‑68 CCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGGAGGGAGG > 1:18328800/1‑68 CCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG > 1:22944620/1‑68 CCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG > 1:42333742/1‑68 CCTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG > 1:33675246/1‑68 CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGT < 1:24152389/68‑1 CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG < 1:36917308/67‑1 CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG < 1:31490644/67‑1 CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG < 1:41301015/67‑1 CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG < 1:17009030/67‑1 CTGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGG < 1:4374089/67‑1 TGCTCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTT < 1:3220583/68‑1 TCACCGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCGCCGGGGGCAGGGAGGTTCGA < 1:15713431/68‑1 TCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGA < 1:23807723/68‑1 TCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCG > 1:6693158/1‑67 TCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCG < 1:26807498/67‑1 TCAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCG < 1:25992405/67‑1 CAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGTGCAGGGAGGTTCG > 1:37225497/1‑66 CAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGAC < 1:18338038/68‑1 CAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGAC < 1:28536043/68‑1 TCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3701708‑3701786‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagcctgctcAACGAGCAGGCTTTTTTGCATCTGCAGCTCATGAGGATGAGAACCTCCGGGGGCAGGGAGGTTCGAC < CP009273/3701789‑3701723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |