| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3701786 | 95 (0.150) | 8 (0.020) | 7/88 | NT | 9.7% | intergenic (‑721/+190) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | = 3701789 | NA (NA) | intergenic (‑724/+187) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 347 total aligned reads displayed.
TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCG > CP009273/3701719‑3701853 | tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:37010871‑M1/68‑1 (MQ=255)tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:39083131‑M1/68‑1 (MQ=255)tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:19304629‑M1/68‑1 (MQ=255)tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC > 1:39977814‑M1/1‑68 (MQ=255)tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:5952160‑M1/68‑1 (MQ=255)tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:43088360‑M1/68‑1 (MQ=255)tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC < 1:43152319‑M1/68‑1 (MQ=255) tCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCaacgagcaggcttttttgcatctgcagctcatga > 1:3847719‑M1/1‑34 (MQ=255) gCTGCAGATGCAAAAAAGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgaga > 1:38653034‑M1/1‑25 (MQ=255) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:17061198/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:24449526/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc < 1:22327197/67‑1 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc < 1:41284046/67‑1 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:35588896/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:16136365/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:49137195/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:14696939/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:13942868/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:6333396/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:34137735/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc < 1:33772621/67‑1 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:33196879/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:9402940/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:30154021/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACt > 1:23631274/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTAGGTGATAGAGGATTAc > 1:20553169/1‑67 (MQ=18) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTAGAATTTGGTCGGTGAGAGAGGATTACt > 1:21064807/1‑68 (MQ=255) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTc > 1:29510535/1‑67 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCg < 1:38021010/68‑1 (MQ=39) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCg < 1:48459651/68‑1 (MQ=39) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCg < 1:319113/68‑1 (MQ=39) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc > 1:12141252/1‑67 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACt < 1:7202033/67‑1 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACt > 1:28315932/1‑67 (MQ=255) aaaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGt < 1:12612535/68‑1 (MQ=255) AAAAGCCTGGTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTg < 1:11351192‑M1/67‑1 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg > 1:9693614‑M1/1‑68 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGGCGGTGATAGAGGATTACTCGCCACTTCGTgg > 1:50993129‑M1/1‑68 (MQ=255) AAAAGCCAGCTCGTTGTCCAGGCTTTTCGAATATGGGCGGTGATAGAGGATTACTCGCCACTTCGTgg > 1:16891131‑M1/1‑68 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg > 1:42402565‑M1/1‑11 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:8988488‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:31523074‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:27049925‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg > 1:41769682‑M1/1‑11 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:13026205‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg > 1:6916137‑M1/1‑11 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:35180894‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcag < 1:33612310‑M1/67‑57 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcag < 1:45040235‑M1/67‑57 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcag < 1:50742063‑M1/67‑57 (MQ=255) aaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcaggg > 1:377164‑M1/1‑10 (MQ=255) aGCCTGCTCaacgagcagggttttttgcatctgcagctcatgtggatgagaacctccgggggcaggga > 1:10006967‑M1/1‑9 (MQ=255) AGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc < 1:46743247‑M1/68‑1 (MQ=255) GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc < 1:22740424‑M1/67‑1 (MQ=255) GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc < 1:3232009‑M1/67‑1 (MQ=255) GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc < 1:11448098‑M1/67‑1 (MQ=255) GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc < 1:17425293‑M1/67‑1 (MQ=255) GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACACGCCACTTCGAGGCTc < 1:44558804‑M1/67‑1 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:46342886‑M1/1‑7 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggt < 1:16619262‑M1/68‑63 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggt < 1:24152389‑M1/68‑63 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:45449735‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:21853943‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:15195493‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:4374089‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:13513554‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:42697316‑M1/67‑62 (MQ=255) CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGc > 1:42777591‑M1/1‑67 (MQ=255) CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGc > 1:44013332‑M1/1‑67 (MQ=255) CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGGGATAGAGGATTACTCGCCACTTCGTGGCTCGc > 1:25621857‑M1/1‑67 (MQ=255) tGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggtt < 1:25219626‑M1/68‑64 (MQ=255) TGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGccc > 1:27933466‑M1/1‑68 (MQ=255) TGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGccc > 1:47037101‑M1/1‑68 (MQ=255) GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 1:28808234‑M1/1‑68 (MQ=255) GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 1:50606889‑M1/1‑68 (MQ=255) GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 1:19689644‑M1/1‑68 (MQ=255) GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 1:7405431‑M1/1‑68 (MQ=255) GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 1:7775906‑M1/1‑68 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcga < 1:36425323‑M1/68‑67 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcga < 1:31032837‑M1/68‑67 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcga < 1:50180964‑M1/68‑67 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg < 1:26807498‑M1/67‑66 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg < 1:26438108‑M1/67‑66 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:6693158‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg < 1:25992405‑M1/67‑66 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:29792148‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:48001553‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg < 1:17941960‑M1/67‑66 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctacgggggcagggacgttag > 1:45976008‑M1/1‑2 (MQ=255) TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTa < 1:35443107‑M1/43‑1 (MQ=255) TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGc < 1:34579509‑M1/68‑1 (MQ=255) TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGc > 1:36048275‑M1/1‑68 (MQ=255) TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGc > 1:40838520‑M1/1‑68 (MQ=255) caacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcgac < 1:15640418‑M1/68‑68 (MQ=255) caacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcgac < 1:36866752‑M1/68‑68 (MQ=255) caacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcgac < 1:18338038‑M1/68‑68 (MQ=255) caacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcgac < 1:833265‑M1/68‑68 (MQ=255) caacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcgac < 1:43520073‑M1/68‑68 (MQ=255) caacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcgac < 1:41464131‑M1/68‑68 (MQ=255) CGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCg < 1:5309470‑M1/68‑1 (MQ=255) | TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCG > CP009273/3701719‑3701853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |