| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 64557 | 545 (0.880) | 34 (0.070) | 10/94 | NT | 6.3% | coding (1224/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 64577 | 560 (1.080) | coding (1204/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 287 total aligned reads displayed.
AATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/64482‑64557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccctggcGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT < CP009273/64577‑64511 ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG < 1:50070424/68‑1 ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG < 1:19867052/68‑1 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGC < 1:798030/68‑1 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGC < 1:8392235/68‑1 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:47774346/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:27783942/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:26625853/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:22543202/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:18795048/1‑67 CAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCC < 1:11241239/68‑1 CAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCC < 1:12257605/68‑1 CAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCC < 1:7672038/68‑1 AAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:1245770/1‑68 AAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:37294170/1‑68 AAGGTGCGTATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:21637700/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:39797715/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:18615093/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:24179862/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:36761903/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:17490400/1‑67 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:7427006/1‑67 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:23419109/1‑67 tGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:46664634/67‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCCCCAGCACTGAATCATAAAGCCCTGG > 1:5463954/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:48412017/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:30966136/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:15395067/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:22978264/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:4625900/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:4557321/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:28687415/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:15008508/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:43487472/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:22091673/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:13575095/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:9007982/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:19622490/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:19454616/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTAAAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:26204688/1‑67 GCTTTTATAGTCCAGCACCAGCACTGAATCATTAAGCCCTGGCGGGGACGTGGTGGATTCACGGCGA‑G > 1:15996175/1‑68 GCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCGGGTACGTGGTGGATTGCCGGCCA‑G > 1:21509305/1‑68 CTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCGGGTACGTGATGGGTTCACGGCCA‑GG > 1:44136443/1‑68 CTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCGGGTACGTGATGGATTCACGGCCA‑GG > 1:8749820/1‑68 ACCAGCACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGT > 1:45843965/1‑68 ACCAGCACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGT > 1:3428041/1‑68 CACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGG > 1:45093828/1‑68 CACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGG > 1:7035817/1‑68 ACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCGA‑GGGCTTTATGATTCAGTGCTGGT > 1:3320675/1‑68 ACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGT > 1:40206040/1‑68 ACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGT > 1:2548010/1‑68 ATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGG > 1:4291451/1‑68 ATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGG > 1:16895450/1‑68 AAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTAT > 1:43873894/1‑68 AAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTAT > 1:48168356/1‑68 AAAGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTAT > 1:2533/1‑68 ccGCCCTGGCGGCTACGTGATGGATTCACCGTCA‑GGGCTTTATGATTCAGTCCTGGTGCTGGACTAT < 1:48041517/65‑1 AGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAA > 1:33843351/1‑68 AGCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAA > 1:49137992/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGGCTTTAGGATTCAGTGCTGGTGCTGGACTATAA > 1:41082534/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAA > 1:1846453/1‑68 CCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:12737571/1‑68 CCCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:14215702/1‑68 CCCTGGCGGCGACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:20520464/1‑68 CCTGGCGGCTACGTGATGGATTCACGGCCT‑GTTCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:34602846/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAc > 1:40385881/1‑66 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:36980765/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:47409510/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:18953879/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:44613452/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:7320573/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:42691855/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:4131021/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:40677962/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:35276428/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:36225110/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:39295167/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:38474976/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:49557961/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:28255196/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:24804075/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:23851508/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:38156449/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:37543472/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:10286914/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGA > 1:10781157/1‑59 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTAAGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:11492183/68‑1 CCTGGCGGCTACGTGATGGATTCACGACCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:17840691/1‑67 CCTGGCGGCTACGGGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGTCTATAAAA > 1:37123424/1‑67 CTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:45180306/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:34938234/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:32750087/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:27137144/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:21161047/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:18271495/68‑1 GCGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG > 1:9801317/1‑64 CGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:42324402/1‑68 CGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:42229532/1‑68 CGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:2972452/1‑68 CGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:23154061/1‑68 CGGCTACGTGATCGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGGGCTGGACTATAAATGCCTGT > 1:28834849/1‑68 AATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/64482‑64557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccctggcGGCTACGTGATGGATTCACGGCCA‑GGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT < CP009273/64577‑64511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |