| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 66560 = | 483 (0.780) | 2581 (6.870) +CGTTTTTTTGGATGGAGGAATT |
52/68 | NT | 87.9% | intergenic (‑28/‑314) | araD/araC | pseudogene, truncated/ara regulon transcriptional activator; autorepressor |
| ? | CP009273 | = 3509273 | 686 (1.110) | intergenic (‑1/+106) | dam/damX | DNA adenine methyltransferase/cell division protein that binds to the septal ring | |||||
Only 100 of 5810 total aligned reads displayed.
TTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/66626‑66560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAA < CP009273/3509273‑3509207 |||||||||||||||||||||| TCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTT < 1:48948718/68‑1 TCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTACATACCCGTT > 1:50080887/1‑68 ATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTT > 1:46282809/1‑68 ATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTT > 1:210796/1‑68 TTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGAT < 1:44873969/68‑1 TTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGAT > 1:23412889/1‑68 TTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGG < 1:19120123/66‑1 AGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCG‑TTTTTTGGATGGA < 1:38223060/68‑1 CGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAG > 1:5154378/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG < 1:48520257/68‑1 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:43544590/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:30882181/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:42144163/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCAAACCCGTTTTTTTGGATGGAGG > 1:15856995/1‑68 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:34527276/1‑67 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:16854871/1‑67 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:7071482/1‑67 CTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTC > 1:45372080/1‑68 ACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCAT > 1:35993168/1‑68 CCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATG > 1:2006631/1‑68 CCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATG > 1:37308254/1‑68 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAA > 1:44424963/1‑68 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAA > 1:26207946/1‑68 GCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAA > 1:48089284/1‑68 GCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAA > 1:39083690/1‑68 CGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCT < 1:42591381/68‑1 GCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTT > 1:6524213/1‑68 GCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTT > 1:12176722/1‑68 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGTTGAATTCATGAAGAAAAATCGCGCTTT < 1:24857066/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAATAATCGCGCTTT < 1:40434231/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:31797215/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:39503660/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:803343/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:18693763/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:14843392/67‑1 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTT > 1:16322730/1‑68 CTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGA < 1:34087699/68‑1 CTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGA < 1:37742370/68‑1 CTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAG < 1:39987376/68‑1 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:19617131/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:17407828/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:29333311/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:13521125/1‑68 CTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG < 1:15406990/68‑1 CTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:45763700/1‑68 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:38663605/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:25263113/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:50908423/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:13124428/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:7589466/1‑67 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:5670565/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:10502839/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:33487528/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC < 1:33065444/68‑1 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:31386222/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:21600206/1‑68 GTTTCTCCATACACGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:23920315/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:1103057/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:47226509/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:22506652/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATAGCGCTTTTTTGAAGTGGGCAG > 1:49754786/1‑68 TCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:35472766/68‑1 TCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:36797273/68‑1 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG < 1:35024749/68‑1 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:8514401/1‑68 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG < 1:22927713/68‑1 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:32185962/1‑68 CCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGG < 1:24369332/68‑1 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:30359865/1‑68 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:9569980/1‑68 ATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCA > 1:41624621/1‑68 ATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCA < 1:18259069/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:28771546/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:20532803/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:2199321/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:12600172/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:4676527/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:25747197/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:10003184/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:4301869/68‑1 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:32655764/1‑68 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:2746208/1‑68 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:363690/1‑68 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:27081795/1‑68 CGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTAT < 1:28347414/68‑1 CGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTAT < 1:50489807/68‑1 TTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCC > 1:4934401/1‑65 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:4763042/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:14030281/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:9016449/68‑1 TGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCT < 1:40867357/68‑1 ATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGA > 1:2984628/1‑68 TGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGAT < 1:43919764/68‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:14383174/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:6111660/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:26622980/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:41211857/67‑1 AATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAT < 1:27904643/67‑1 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:17836795/1‑67 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:11641550/1‑67 |||||||||||||||||||||| TTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/66626‑66560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAA < CP009273/3509273‑3509207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |